DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or59b

DIOPT Version :10

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523822.1 Gene:Or59b / 37715 FlyBaseID:FBgn0034865 Length:398 Species:Drosophila melanogaster


Alignment Length:378 Identity:69/378 - (18%)
Similarity:161/378 - (42%) Gaps:79/378 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LMQFVYLLRMWGDLPAFILNMFFFSAIFNALMRTWLVIIKRRQFEEFL-GQLAT----------- 96
            ::::|||  .|..:| |...:|:....|        :|...::|:.|. |:..|           
  Fly    41 VLRYVYL--FWTCVP-FAFGVFYLPVGF--------IISYVQEFKNFTPGEFLTSLQVCINVYGA 94

  Fly    97 --------LF-------HSILDSTDEWGRGILRRAERE------AR-NLAILNLSASFLDIVGAL 139
                    ||       ..:|||.|   :.:...::||      || |.|.|..|..:....|:.
  Fly    95 SVKSTITYLFLWRLRKTEILLDSLD---KRLANDSDRERIHNMVARCNYAFLIYSFIYCGYAGST 156

  Fly   140 VSPLFREERAHPFGLALPGV-------SMTSSPVYEVIYLA------QLPT--PLLLSMMYMPFV 189
            ........|. |:.:..|.:       |:....::|.|.::      ||..  ||:.::|:    
  Fly   157 FLSYALSGRP-PWSVYNPFIDWRDGMGSLWIQAIFEYITMSFAVLQDQLSDTYPLMFTIMF---- 216

  Fly   190 SLFAGLAIFGKAMLQILVHRLGQIGGE-EQSEEERFQRLASCIAYHTQVMRYVWQLNKLVANIVA 253
                      :|.:::|...:..:..: |:||.:.:|.|.:|:..|..:::....:..:::..:.
  Fly   217 ----------RAHMEVLKDHVRSLRMDPERSEADNYQDLVNCVLDHKTILKCCDMIRPMISRTIF 271

  Fly   254 VEAIIFGSIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVP 318
            |:..:.||::...|..:...::..:.::.:::::|:|...|.:....|.:..:...::..::...
  Fly   272 VQFALIGSVLGLTLVNVFFFSNFWKGVASLLFVITILLQTFPFCYTCNMLIDDAQDLSNEIFQSN 336

  Fly   319 WYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLR 371
            |.:|..|::.||::|:...|.|:....|.::|:::....::...::|..|::|
  Fly   337 WVDAEPRYKATLVLFMHHVQQPIIFIAGGIFPISMNSNITVAKFAFSIITIVR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 62/357 (17%)
Or59bNP_523822.1 7tm_6 77..382 CDD:251636 55/322 (17%)

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