DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or49b

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523721.1 Gene:Or49b / 36413 FlyBaseID:FBgn0028963 Length:375 Species:Drosophila melanogaster


Alignment Length:377 Identity:114/377 - (30%)
Similarity:198/377 - (52%) Gaps:9/377 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EDIGLVGINVRMWRHLAVLYPTPGSSWRKFAFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFS 68
            |||.|:.:|:::.|..|:||   ..:.|::..:...:.....|.||::.....|...|.|.:...
  Fly     3 EDIQLIYMNIKILRFWALLY---DKNLRRYVCIGLASFHIFTQIVYMMSTNEGLTGIIRNSYMLV 64

  Fly    69 AIFNALMRTWLVIIKRRQFEEFLGQLATLFHSILDSTDEWGRGILRRAEREARNLAILNLSASFL 133
            ...|.::|.:|::....::...:.:|...::.:|:..|.:...||.:..:..:.:|..||....|
  Fly    65 LWINTVLRAYLLLADHDRYLALIQKLTEAYYDLLNLNDSYISEILDQVNKVGKLMARGNLFFGML 129

  Fly   134 DIVGALVSPLFREERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSMMYMPFVSLFAGLAIF 198
            ..:|..:.||...||..|||..:||::...||.||:.|:.|:....:...||:|:.||..||.:|
  Fly   130 TSMGFGLYPLSSSERVLPFGSKIPGLNEYESPYYEMWYIFQMLITPMGCCMYIPYTSLIVGLIMF 194

  Fly   199 GKAMLQILVHRLGQIG-----GEEQSEEERFQRLASCIAYHTQVMRYVWQLNKLVANIVAVEAII 258
            |....:.|.|||.|:.     |:....|.| :.:.:||.|...::.|:..:|:|...:...|.:.
  Fly   195 GIVRCKALQHRLRQVALKHPYGDRDPRELR-EEIIACIRYQQSIIEYMDHINELTTMMFLFELMA 258

  Fly   259 FGSIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAG 323
            |.:::|:|||.|.|::..:|:|.:.|||..:|..:...|..|||:..:|..||.|.|...|:...
  Fly   259 FSALLCALLFMLIIVSGTSQLIIVCMYINMILAQILALYWYANELREQNLAVATAAYETEWFTFD 323

  Fly   324 TRFRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLRGVTG 375
            ...||.:|..:|:.|.|..|.:||:.|:||.:||:|||.:|::||:|:.|.|
  Fly   324 VPLRKNILFMMMRAQRPAAILLGNIRPITLELFQNLLNTTYTFFTVLKRVYG 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 95/312 (30%)
Or49bNP_523721.1 7tm_6 53..364 CDD:251636 95/311 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468950
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2D43E
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26793
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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