DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or43b

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:438 Identity:79/438 - (18%)
Similarity:158/438 - (36%) Gaps:124/438 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MWRHLAVLYPTPGSS--------------------------------WRKFAF-----VLPVTAM 42
            |:.|..::||.|.|.                                ||.|:|     :|||:  
  Fly     1 MFGHFKLVYPAPISEPIQSRDSNAYMMETLRNSGLNLKNDFGIGRKIWRVFSFTYNMVILPVS-- 63

  Fly    43 NLMQFVYLLRMWGDLPAFILNMFFFSAIFNALMRTWLVIIKRRQFEEFLGQLATLFHSILDST-- 105
              ....|::.:....|..:|..      ....:.||...:|              |.:::..|  
  Fly    64 --FPINYVIHLAEFPPELLLQS------LQLCLNTWCFALK--------------FFTLIVYTHR 106

  Fly   106 --------DEWGRGILRRAE-REARNL--AILNLSASFLDIVGALVSPLFREERAH---PFGLAL 156
                    ||..:..::.|| |:.|::  .|..|..:|:.:.....:....:...|   |:....
  Fly   107 LELANKHFDELDKYCVKPAEKRKVRDMVATITRLYLTFVVVYVLYATSTLLDGLLHHRVPYNTYY 171

  Fly   157 PGVS-------------------------MTSSPVYEVIYLAQLPTPLLLSMMYMPFVSLFAGLA 196
            |.::                         .|::..|.|||:|.|.|.:||               
  Fly   172 PFINWRVDRTQMYIQSFLEYFTVGYAIYVATATDSYPVIYVAALRTHILL--------------- 221

  Fly   197 IFGKAMLQILVHRLGQIGGEEQSEEE-RFQRLASCIAYHTQVMRYVWQLNKLVANIVAVEAIIFG 260
                  |:..:..||....|..|:.. .|:.|..||..|..::.:...:..:::..:..:.||.|
  Fly   222 ------LKDRIIYLGDPSNEGSSDPSYMFKSLVDCIKAHRTMLNFCDAIQPIISGTIFAQFIICG 280

  Fly   261 SIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTR 325
            ||:..::..:.:....:....||:|::.:|...|......|.|..:...:|.|:::..|:....|
  Fly   281 SILGIIMINMVLFADQSTRFGIVIYVMAVLLQTFPLCFYCNAIVDDCKELAHALFHSAWWVQDKR 345

  Fly   326 FRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373
            :::|::.||.:.|.||.....|::.:.||...::...:::.:.:..|:
  Fly   346 YQRTVIQFLQKLQQPMTFTAMNIFNINLATNINVAKFAFTVYAIASGM 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 64/349 (18%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 60/323 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465779
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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