DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or42b

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:411 Identity:75/411 - (18%)
Similarity:149/411 - (36%) Gaps:122/411 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KFAFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFSAIFNAL--MRTWLVIIKRRQFEEFLGQL 94
            ||...|| ....::::|||        .:.|..|.:...:..|  :.:::..||.....|||..|
  Fly    29 KFIGWLP-PKQGVLRYVYL--------TWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSL 84

  Fly    95 ATLFH----------------------SILDSTDEWGRGILR---RAEREARNLAILNLSASFLD 134
            ....:                      :|||..|      ||   ..|||..:|.:...:.:|| 
  Fly    85 QVCINAYGSSVKVAITYSMLWRLIKAKNILDQLD------LRCTAMEEREKIHLVVARSNHAFL- 142

  Fly   135 IVGALVSPLFREERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSM--------MYMPFVSL 191
                                           ::..:|.....:..|.|:        :|.||:..
  Fly   143 -------------------------------IFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDW 176

  Fly   192 FAG------------LAIFG-------------------KAMLQILVHRLGQIGGEEQ-SEEERF 224
            ..|            :.:.|                   :|.|.:|..|:.::..:|. ||.|.:
  Fly   177 HDGTLKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESY 241

  Fly   225 QRLASCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSI----ICSLLFCLNIITSPTQVISIVMY 285
            :.|..|:..|..::||...:..::...:..:.::.|.:    :.::.|..:|.|.    |:..|:
  Fly   242 EELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTG----IASFMF 302

  Fly   286 ILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYP 350
            ::|:|...|.:....|.|..:...:..|::...|.:|..|::.|||.||...|.|:....|.::.
  Fly   303 VITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQ 367

  Fly   351 MTLAMFQSLLNASYSYFTMLR 371
            ::::...|:...::|..|:.:
  Fly   368 ISMSSNISVAKFAFSVITITK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 66/378 (17%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 61/346 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465785
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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