DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or42a

DIOPT Version :10

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:389 Identity:84/389 - (21%)
Similarity:165/389 - (42%) Gaps:89/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KF--AFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFS---------AIFNA------LMRTWL 79
            ||  |:||...|:|.....|  :..|.|..:|.::..||         ..|||      ::..|.
  Fly    43 KFFVAYVLWSFALNFCSTFY--QPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWA 105

  Fly    80 VIIKRRQFEEFLGQLATLFHSILDSTDEWGRGILRRAEREARNLAILNLSASFLDIVGALVSPLF 144
            ::   ::|:|        .:::||..|   |.|....||...:.|: :||               
  Fly   106 LV---KRFDE--------ANNLLDEMD---RRITDPGERLQIHRAV-SLS--------------- 140

  Fly   145 REERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSMMYMPF---------VSLFAGLAIFG- 199
              .|...|.:|:..|..|:: ....|::.:.|     ...|.||         ::|.|||..|. 
  Fly   141 --NRIFFFFMAVYMVYATNT-FLSAIFIGRPP-----YQNYYPFLDWRSSTLHLALQAGLEYFAM 197

  Fly   200 ---------------------KAMLQILVHRLGQIGG-EEQSEEERFQRLASCIAYHTQVMRYVW 242
                                 :|.:.|...||.::|. ..:|:|::::||..||..|..::|:|.
  Fly   198 AGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVD 262

  Fly   243 QLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLEN 307
            .|..:::..:.|:.::.|.::...|..:.:..:....|:.:.::..:|.....:....|.:..:.
  Fly   263 CLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDC 327

  Fly   308 NRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLR 371
            .::|:|::...|.:...|::|||:.||.:.|.|:.....||:|:::....|:...|:|.||:::
  Fly   328 YKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 71/354 (20%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 68/342 (20%)

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