DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or43a and Or42a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:389 Identity:84/389 - (21%)
Similarity:165/389 - (42%) Gaps:89/389 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KF--AFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFS---------AIFNA------LMRTWL 79
            ||  |:||...|:|.....|  :..|.|..:|.::..||         ..|||      ::..|.
  Fly    43 KFFVAYVLWSFALNFCSTFY--QPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWA 105

  Fly    80 VIIKRRQFEEFLGQLATLFHSILDSTDEWGRGILRRAEREARNLAILNLSASFLDIVGALVSPLF 144
            ::   ::|:|        .:::||..|   |.|....||...:.|: :||               
  Fly   106 LV---KRFDE--------ANNLLDEMD---RRITDPGERLQIHRAV-SLS--------------- 140

  Fly   145 REERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSMMYMPF---------VSLFAGLAIFG- 199
              .|...|.:|:..|..|:: ....|::.:.|     ...|.||         ::|.|||..|. 
  Fly   141 --NRIFFFFMAVYMVYATNT-FLSAIFIGRPP-----YQNYYPFLDWRSSTLHLALQAGLEYFAM 197

  Fly   200 ---------------------KAMLQILVHRLGQIGG-EEQSEEERFQRLASCIAYHTQVMRYVW 242
                                 :|.:.|...||.::|. ..:|:|::::||..||..|..::|:|.
  Fly   198 AGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVD 262

  Fly   243 QLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLEN 307
            .|..:::..:.|:.::.|.::...|..:.:..:....|:.:.::..:|.....:....|.:..:.
  Fly   263 CLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFCILCNYLTEDC 327

  Fly   308 NRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLR 371
            .::|:|::...|.:...|::|||:.||.:.|.|:.....||:|:::....|:...|:|.||:::
  Fly   328 YKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVK 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 71/354 (20%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 68/342 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465776
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.