DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or30a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster


Alignment Length:369 Identity:106/369 - (28%)
Similarity:184/369 - (49%) Gaps:18/369 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VRMWRHLAVLYPTPGSSWRKFAFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFSAIFNALMRT 77
            ::.|.:|.|      .:||::..:.|...:|..|:|.:......|...|.|::......|.::|.
  Fly    21 MKFWSYLFV------HNWRRYVAMTPYIIINCTQYVDIYLSTESLDFIIRNVYLAVLFTNTVVRG 79

  Fly    78 WLVIIKRRQFEEFLGQLATLFHSILDSTDEWGRGILRRAEREARNLAIL----NLSASFLDIVGA 138
            .|:.::|..:|.|:..|.:.:..:|.|.|.    |:....:|...|::|    ||.......:|.
  Fly    80 VLLCVQRFSYERFINILKSFYIELLQSDDP----IINILVKETTRLSVLISRINLLMGCCTCIGF 140

  Fly   139 LVSPLFREERAHPFGLALPGVS--MTSSPVYEVIYLAQLPTPLLLSMMYMPFVSLFAGLAIFGKA 201
            :..|:|..||..|:|:.||.:.  ..:||.||:.::.|.....:...||:|:.::.....:|...
  Fly   141 VTYPIFGSERVLPYGMYLPTIDEYKYASPYYEIFFVIQAIMAPMGCCMYIPYTNMVVTFTLFAIL 205

  Fly   202 MLQILVHRLGQIGGEEQSEEERFQRLASCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSIICSL 266
            |.::|.|:|..:  |:...|:....:..||.|..::..:|..:|.|..::..||.:.||:::|.|
  Fly   206 MCRVLQHKLRSL--EKLKNEQVRGEIIWCIKYQLKLSGFVDSMNALNTHLHLVEFLCFGAMLCVL 268

  Fly   267 LFCLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLL 331
            ||.|.|..:..|.:.::.|::.:.......|..|||:..::..:|.|.|...|.:.....:|||.
  Fly   269 LFSLIIAQTIAQTVIVIAYMVMIFANSVVLYYVANELYFQSFDIAIAAYESNWMDFDVDTQKTLK 333

  Fly   332 IFLMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLRGVTG 375
            ..:|::|.|:.|.||..|||.|.|.||||||.||:||:||.|.|
  Fly   334 FLIMRSQKPLAILVGGTYPMNLKMLQSLLNAIYSFFTLLRRVYG 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 89/313 (28%)
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 89/313 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468952
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2D43E
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26793
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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