DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or24a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:416 Identity:84/416 - (20%)
Similarity:154/416 - (37%) Gaps:81/416 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RHLAVLYPTPGSSWRKFAFVLPVTAMNLMQF------VYLLRMWGDLPAFILNMFFFSAIFNAL- 74
            |.|...||     ..:..|::|..|::|:.|      ..|:::|.....|||....::..:..: 
  Fly     4 RFLTASYP-----MERHYFMVPKFALSLIGFYPEQKRTVLVKLWSFFNFFILTYGCYAEAYYGIH 63

  Fly    75 ----------------MRTWLVIIKRRQFEEFLGQLATLFHSILDSTDEWGR----GILRRAERE 119
                            ..:.|.::|......:..:|.:|...:...|::...    |..:|....
  Fly    64 YIPINIATALDALCPVASSILSLVKMVAIWWYQDELRSLIERVRFLTEQQKSKRKLGYKKRFYTL 128

  Fly   120 ARNLAILNLSASFLD----IVGALVSPLFREERAH--------PFGLALPGVSMTSSPVYEVIYL 172
            |..|..|.|...|..    .|..|:..:.|  |.|        ||.:..|.: :...|:|.:.|:
  Fly   129 ATQLTFLLLCCGFCTSTSYSVRHLIDNILR--RTHGKDWIYETPFKMMFPDL-LLRLPLYPITYI 190

  Fly   173 AQLPTPLLLSMMYMPFVSLFAGLAIFGKAMLQIL---VHRLGQIGGEEQS----EEERFQR-LAS 229
            .......:..:.::.....|.|..::...:|..|   |..|.::...|:|    ||.|..| :..
  Fly   191 LVHWHGYITVVCFVGADGFFLGFCLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEEARIVREMEK 255

  Fly   230 CIAYHTQVMRYVWQLNKL-----VANIVAVEAIIFGSIICSLLFCLNIITSPTQVISIVMYILTM 289
            .:..|.:|.....:|:.:     :|:.|....||..|::..|||      |...:|..|:|...:
  Fly   256 LVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLF------SGLGIIVYVVYTCAV 314

  Fly   290 LYVLFTYYNRANEICLENNRVAEAVYNVP-------WYEAGTRFRKTLLIFLMQTQHPMEIRVGN 347
            ...:|.|       ||..:.:.||..|:.       ||....|.:|..|:.:.:.|..:.|::..
  Fly   315 GVEIFLY-------CLGGSHIMEACSNLARSTFSSHWYGHSVRVQKMTLLMVARAQRVLTIKIPF 372

  Fly   348 VYPMTLAMFQSLLNASYSYFTMLRGV 373
            ..| :|....|:|..:.|...:.:.|
  Fly   373 FSP-SLETLTSILRFTGSLIALAKSV 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 71/360 (20%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 68/336 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465285
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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