DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or23a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster


Alignment Length:424 Identity:82/424 - (19%)
Similarity:148/424 - (34%) Gaps:130/424 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 INVRMWRHLAVLYPTPGSSW-----------------------------RKFAFVLPVTAM-NLM 45
            :.:..||....|..:.|..|                             ..|:..|.||:: |||
  Fly    14 VQLNAWRICGALDLSEGRYWSWSMLLCILVYLPTPMLLRGVYSFEDPVENNFSLSLTVTSLSNLM 78

  Fly    46 QF-VYLLRMWGDLPAFILNMFFFSAIFNALMRTWLVIIKRRQFEEFLGQLATLFHSILDSTDEWG 109
            :| :|:.:                            :.|..:.:..:|||......  :|..|..
  Fly    79 KFCMYVAQ----------------------------LTKMVEVQSLIGQLDARVSG--ESQSERH 113

  Fly   110 RGILRRAEREARNLAILNLSASFLDIVGALVSPLFREERAHPFGLALPGVSMTSSPVY------- 167
            |.:   .|...|...:..::.:.:.|:.| |..:|..|.:.|..:..|.....|...|       
  Fly   114 RNM---TEHLLRMSKLFQITYAVVFIIAA-VPFVFETELSLPMPMWFPFDWKNSMVAYIGALVFQ 174

  Fly   168 EVIYLAQLP--------TPLLLSMMYMPFVSLFAGLAIFGKAMLQILVHRLGQIGGEEQSEEERF 224
            |:.|:.|:.        .||:|.::               ....|:|:.|:.:||...::.||..
  Fly   175 EIGYVFQIMQCFAADSFPPLVLYLI---------------SEQCQLLILRISEIGYGYKTLEENE 224

  Fly   225 QRLASCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVISIVMYILTM 289
            |.|.:||.....:.|.:.....||:..:.|:.::.|..|...||.|            :.|:.|:
  Fly   225 QDLVNCIRDQNALYRLLDVTKSLVSYPMMVQFMVIGINIAITLFVL------------IFYVETL 277

  Fly   290 ----LYVLF-------TYYNRANEICLENNRVAE-------AVYNVPWYEAGTRFRKTLLIFLMQ 336
                .|:.|       ||     .:|.....|.|       ||:...|.:....:|..:||...:
  Fly   278 YDRIYYLCFLLGITVQTY-----PLCYYGTMVQESFAELHYAVFCSNWVDQSASYRGHMLILAER 337

  Fly   337 TQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTML 370
            |:....:..||:.|:.|:.:.:....:||:||::
  Fly   338 TKRMQLLLAGNLVPIHLSTYVACWKGAYSFFTLM 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 64/340 (19%)
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 73/371 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465755
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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