DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or43a and Or13a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster


Alignment Length:420 Identity:81/420 - (19%)
Similarity:149/420 - (35%) Gaps:88/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MWRHLAVLYPTPGSS--WRKFAFVLPVTAMNLMQFVYLLRMWGDL----------PAFILNMF-- 65
            :|..|...:|...||  ||         :.:|:...|::..|..:          .||:||..  
  Fly    17 VWLKLNGSWPLTESSRPWR---------SQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSD 72

  Fly    66 ----------FFSAIFNALMRTWLVIIKRRQFEEFLGQLATLFHSILDSTDEW-GRGILRRAERE 119
                      .|..:.| .:|...:.:.:|:|.:.:...         |.:.| ..........|
  Fly    73 IIITTENCCTTFMGVLN-FVRLIHLRLNQRKFRQLIENF---------SYEIWIPNSSKNNVAAE 127

  Fly   120 ARN-----------LAILNLSASFLDIVGALVSPLF-REERAHPFGLALPGVSMTSSPVYEVIYL 172
            .|.           ||.|.:....|.:|.....|.| .:.:..|:.:..|..:.:|...|.:.|:
  Fly   128 CRRRMVTFSIMTSLLACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFPYDAQSSWIRYVMTYI 192

  Fly   173 AQLPTPLLLSMMYMPFVSLFAGLAIFG------KAMLQILVHRL-GQIGGE--EQSEEERFQRLA 228
            ......:.:      ..:|||...|.|      .....:|..|: |...|.  |.:|..:.:||.
  Fly   193 FTSYAGICV------VTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLERLK 251

  Fly   229 SCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVI----SIVMYILTM 289
            ..:..|..::.:..:|......|:....:|...:||.:.|  .|:|.....|    ..::||.:.
  Fly   252 RIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGF--QIVTGKNMFIGDYVKFIIYISSA 314

  Fly   290 LYVLFTYYNRANEICLENNRVAEAVYNVPWYEAG-----------TRFRKTLLIFLMQTQHPMEI 343
            |..|:......:.:..::...|:.:|...|..:.           .|.|..:...::.:|.|:.|
  Fly   315 LSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRI 379

  Fly   344 RVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373
            .......::|..|.::|:.|.||||:||.|
  Fly   380 TAFKFSTLSLQSFTAILSTSISYFTLLRSV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 63/366 (17%)
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 59/338 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466136
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.