DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or43a and Or2a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster


Alignment Length:408 Identity:94/408 - (23%)
Similarity:157/408 - (38%) Gaps:85/408 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RMWRHLAVLYPTPGSSWRKFAFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFSAIFNALMRTW 78
            |:|....::.| ||.|  ...:|:....:||:..|.       .|..:|....|:.....|....
  Fly    20 RVWELTGLMRP-PGVS--SLLYVVYSITVNLVVTVL-------FPLSLLARLLFTTNMAGLCENL 74

  Fly    79 LVIIK--------------RRQFEEFLGQLATLFHSILDSTDEWGR--------GILRR----AE 117
            .:.|.              |:|..|        ..|:|...|...|        ..||:    |:
  Fly    75 TITITDIVANLKFANVYMVRKQLHE--------IRSLLRLMDARARLVGDPEEISALRKEVNIAQ 131

  Fly   118 REARNLAILNLSASFLDIVGALVSPLFREERAHPFGLALPGVS-MTSSPVYEVIYLAQLPTPLLL 181
            ...|..|.:.:..:.|..|..:|.|  ..|..:|   |..||. |.|:..|.:|.:.||...::.
  Fly   132 GTFRTFASIFVFGTTLSCVRVVVRP--DRELLYP---AWFGVDWMHSTRNYVLINIYQLFGLIVQ 191

  Fly   182 SMM------YMP-FVSLFAGLAIFGKAMLQILVHRLG-----QIGGE--EQSEEERFQRLASCIA 232
            ::.      |.| |:.|..|    ....|::.|.|:|     ...|:  |...||.:|.|..||.
  Fly   192 AIQNCASDSYPPAFLCLLTG----HMRALELRVRRIGCRTEKSNKGQTYEAWREEVYQELIECIR 252

  Fly   233 YHTQVMRYVWQLNKLVANIVAVEAIIFGSIICS----------LLFCLNIITSPTQVISIVMYIL 287
            ...:|.|    |.:::..:::|..:  ...:||          .|:..:.......:||||.:..
  Fly   253 DLARVHR----LREIIQRVLSVPCM--AQFVCSAAVQCTVAMHFLYVADDHDHTAMIISIVFFSA 311

  Fly   288 TMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYPMT 352
            ..|.|....| ..:.:..::..:.:|.|:..|.|...:|::.||..|.:||.|..|..||...::
  Fly   312 VTLEVFVICY-FGDRMRTQSEALCDAFYDCNWIEQLPKFKRELLFTLARTQRPSLIYAGNYIALS 375

  Fly   353 LAMFQSLLNASYSYFTML 370
            |..|:.::..:||.||:|
  Fly   376 LETFEQVMRFTYSVFTLL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 79/358 (22%)
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 76/344 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465773
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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