DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or43a and Or1a

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:337 Identity:73/337 - (21%)
Similarity:126/337 - (37%) Gaps:69/337 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 NALMRTWLVIIKRRQFEEFLGQLATLF-HSILDSTDEWGRGILRRAEREARNLAIL------NLS 129
            ::|::..:.:.|.....:.:.|:.:.| ...|..| ||     |...:..:.:|.:      ..|
  Fly    81 SSLLKMAIFLAKSHDLVDLIQQIQSPFTEEDLVGT-EW-----RSQNQRGQLMAAIYFMMCAGTS 139

  Fly   130 ASFLDIVGALVSPLFREERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSMMYMPFVSLF-- 192
            .|||.:..||....:     |..|...|..|......|:|..    |....:....|.||..|  
  Fly   140 VSFLLMPVALTMLKY-----HSTGEFAPVSSFRVLLPYDVTQ----PHVYAMDCCLMVFVLSFFC 195

  Fly   193 ---AGL-AIFGKAMLQILV--HRLGQIGGEEQSEEERFQRLASC-------------IAYHTQVM 238
               .|: .::|...|.:.:  .||||          :.:|:.||             ...|.:::
  Fly   196 CSTTGVDTLYGWCALGVSLQYRRLGQ----------QLKRIPSCFNPSRSDFGLSGIFVEHARLL 250

  Fly   239 RYVWQLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVISIV-MYILTMLYVLFTYYNRANE 302
            :.|...|.....|..||.:|...:.||:: |..|:....|..:.: .:.|.:...|..|...|.:
  Fly   251 KIVQHFNYSFMEIAFVEVVIICGLYCSVI-CQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQ 314

  Fly   303 ICLENNRVAEAVYNV-PWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVY-----PM------TLAM 355
            :.||..|.:..:|.| ||.....:.||..|..:.:.|.  |..:|..:     |:      |...
  Fly   315 VRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQR--ETVLGAYFFELGRPLLVWIFRTAGS 377

  Fly   356 FQSLLNASYSYF 367
            |.:|:||.|:.:
  Fly   378 FTTLMNALYAKY 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 72/332 (22%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 68/322 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465664
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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