DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or43a and Or19b

DIOPT Version :9

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster


Alignment Length:430 Identity:89/430 - (20%)
Similarity:150/430 - (34%) Gaps:106/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIEDIGLVGINVRMWRHLAVLYPTP-------GSSWRKFAFVLPVT---------AMNLMQFVY 49
            |.|..:......|..||...::...|       |..:..::.|..||         ::||:|...
  Fly     1 MDISKVDSTRALVNHWRIFRIMGIHPPGKRTFWGRHYTAYSMVWNVTFHICIWVSFSVNLLQSNS 65

  Fly    50 LLRMWGDLPAFILNMFFFSAIFNALMRTWLVIIKRRQFEEFLGQ--LATLFHSILDSTDEWGRGI 112
            |......|...:.:..:...:.|.          ||...|.:..  |..|....|...||  |.|
  Fly    66 LETFCESLCVTMPHTLYMLKLINV----------RRMRGEMISSHWLLRLLDKRLGCADE--RQI 118

  Fly   113 ----LRRAEREARN----------LAILNLSASFLDIVGALVSPLFREERAHPFGLALPGVSMTS 163
                :.|||...|.          |.|:.:|||              .|....:...:|.....|
  Fly   119 IMAGIERAEFIFRTIFRGLACTVVLGIIYISAS--------------SEPTLMYPTWIPWNWKDS 169

  Fly   164 SPVYEVIYLAQLPTPLLLSMMYMPFVSLFAGLAIF-GKAMLQILVH------RLGQIGGEEQSEE 221
            :..|       |.|.:|.:...|...:|...|:.: |..::.:.||      |:.::|.......
  Fly   170 TSAY-------LATAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPA 227

  Fly   222 ERFQR-LASCIAYHTQVMRYVWQLNKLV-------------ANIVAVEAIIFGSI----ICSLLF 268
            .|.|. |...|..|..::|....|.:.:             |.......::||::    ..::||
  Fly   228 VRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFGNVGIMRFMNMLF 292

  Fly   269 CLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIF 333
            .|.|:|:.|            |.:.:|    |...|.|...:..|||:..|......||:.||:.
  Fly   293 LLVILTTET------------LLLCYT----AELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLM 341

  Fly   334 LMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373
            |.:.|.||.:..|.:.|:::..|..::..:|:..|:|..:
  Fly   342 LARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 72/348 (21%)
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 73/355 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465767
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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