DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or43a and Or19b

DIOPT Version :10

Sequence 1:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_728315.1 Gene:Or19b / 260693 FlyBaseID:FBgn0062565 Length:387 Species:Drosophila melanogaster


Alignment Length:430 Identity:89/430 - (20%)
Similarity:150/430 - (34%) Gaps:106/430 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTIEDIGLVGINVRMWRHLAVLYPTP-------GSSWRKFAFVLPVT---------AMNLMQFVY 49
            |.|..:......|..||...::...|       |..:..::.|..||         ::||:|...
  Fly     1 MDISKVDSTRALVNHWRIFRIMGIHPPGKRTFWGRHYTAYSMVWNVTFHICIWVSFSVNLLQSNS 65

  Fly    50 LLRMWGDLPAFILNMFFFSAIFNALMRTWLVIIKRRQFEEFLGQ--LATLFHSILDSTDEWGRGI 112
            |......|...:.:..:...:.|.          ||...|.:..  |..|....|...||  |.|
  Fly    66 LETFCESLCVTMPHTLYMLKLINV----------RRMRGEMISSHWLLRLLDKRLGCADE--RQI 118

  Fly   113 ----LRRAEREARN----------LAILNLSASFLDIVGALVSPLFREERAHPFGLALPGVSMTS 163
                :.|||...|.          |.|:.:|||              .|....:...:|.....|
  Fly   119 IMAGIERAEFIFRTIFRGLACTVVLGIIYISAS--------------SEPTLMYPTWIPWNWKDS 169

  Fly   164 SPVYEVIYLAQLPTPLLLSMMYMPFVSLFAGLAIF-GKAMLQILVH------RLGQIGGEEQSEE 221
            :..|       |.|.:|.:...|...:|...|:.: |..::.:.||      |:.::|.......
  Fly   170 TSAY-------LATAMLHTTALMANATLVLNLSSYPGTYLILVSVHTKALALRVSKLGYGAPLPA 227

  Fly   222 ERFQR-LASCIAYHTQVMRYVWQLNKLV-------------ANIVAVEAIIFGSI----ICSLLF 268
            .|.|. |...|..|..::|....|.:.:             |.......::||::    ..::||
  Fly   228 VRMQAILVGYIHDHQIILRLFKSLERSLSMTCFLQFFSTACAQCTICYFLLFGNVGIMRFMNMLF 292

  Fly   269 CLNIITSPTQVISIVMYILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIF 333
            .|.|:|:.|            |.:.:|    |...|.|...:..|||:..|......||:.||:.
  Fly   293 LLVILTTET------------LLLCYT----AELPCKEGESLLTAVYSCNWLSQSVNFRRLLLLM 341

  Fly   334 LMQTQHPMEIRVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373
            |.:.|.||.:..|.:.|:::..|..::..:|:..|:|..:
  Fly   342 LARCQIPMILVSGVIVPISMKTFTVMIKGAYTMLTLLNEI 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 72/348 (21%)
Or19bNP_728315.1 7tm_6 65..372 CDD:251636 73/355 (21%)

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