DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpinb6c

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_683744.2 Gene:Serpinb6c / 97848 MGIID:2145481 Length:379 Species:Mus musculus


Alignment Length:398 Identity:95/398 - (23%)
Similarity:179/398 - (44%) Gaps:49/398 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHAS--- 92
            |...::..|.|.|...|| .....||.:||:.|.:||.::...:......|:.|||.|...|   
Mouse     4 PLLEANATFALNLLKILG-EDRSKNVFLSPISISSALVMVLLGAKGTTAIQITQALSLGKCSSSE 67

  Fly    93 ----HPKLAVQDFETLLTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHR-- 151
                |     |.|:.||:::.::.. ...|:..:.|:.::  ||:....|:.       .||:  
Mouse    68 DGDVH-----QGFQLLLSEVNKTGT-QYSLKAANRLFGEK--TFDILASFKD-------SCHKFY 117

  Fly   152 ------LSWESAS-NAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAW 209
                  |.::.|: .:.|.||.....::...:.||:|...:.|    |||.:.|:.|.|:..|..
Mouse   118 EAEMEELDFKGATEQSRQHINTWVAKKTEDKIKELLSPGTIHS----NTPLILVNAVYFKGKWEK 178

  Fly   210 AFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDG 274
            .|:..:|:.:.|....|..:.|..||.:..::...|..:..:::.:|:...:|.|:|:.|:....
Mouse   179 QFNKEDTREMPFKVSKNEEKPVQMMFQKSTFKMTYVEEISTKILLLPYVGNELNMIIMLPDEHVE 243

  Fly   275 LAQLERKLAQSDLHQLR--SQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVF 337
            |:.:|:::......:..  .:::..||.:.||..::..:.|:|.||.:||:...|  |...:: |
Mouse   244 LSTVEKEITHEKFIEWTRLDRMKGEKVEVFLPWFKLEENYDMKDVLCKLGMTDAF--EEGRAD-F 305

  Fly   338 SSILSSSAPPLGAVVQSGLLELQEDGGNADDSFSF---GDLFRRALP-LVINHPFFYAIGNGKT- 397
            |.|.|.....|..|:...::|:.|:|..|..:.:.   |.  .|:.| ..:|.||.:.|.:.|| 
Mouse   306 SGISSKQGLFLSNVIHKSVVEVNEEGSEATAATTIVLKGS--SRSTPCFCVNRPFIFFIQHIKTN 368

  Fly   398 -LLLSGHI 404
             :|..|.:
Mouse   369 EILFLGRL 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 94/395 (24%)
Serpinb6cNP_683744.2 serpin 2..379 CDD:476815 95/398 (24%)

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