DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ad and SRP3

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_176586.1 Gene:SRP3 / 842706 AraportID:AT1G64030 Length:385 Species:Arabidopsis thaliana


Alignment Length:389 Identity:78/389 - (20%)
Similarity:150/389 - (38%) Gaps:81/389 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHPKLAVQDFETLLTDL------KQS 111
            |:||:.||..|.:|:::..|....:..|  .|.|....:|    ::.:.:|:..:|      .:|
plant    28 DSNVIFSPASINSAITMHAAGPGGDLVS--GQILSFLRSS----SIDELKTVFRELASVVYADRS 86

  Fly   112 AAIGCRLRLLSDLYAQQ------RFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLS 170
            |..|.::...:.|:..:      :|...|.|.|:.:...:...      ..|....:::|.....
plant    87 ATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFR------SEAEEVRKEVNSWVEH 145

  Fly   171 RSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMF 235
            .:|..:.:|:....:.||    |..::.:.::|:..|...|:...|:..:|:........|..| 
plant   146 HTNNLIKDLLPDGSVTSL----TNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM- 205

  Fly   236 GQHRYRYAEVPALDA-QLIEVPF------ATADLRMLIVFPNRPDGLAQLERKLAQS----DLH- 288
              ..|....|.|.|. :::.:|:      ......|....|::.|||..|..|:|.:    |.| 
plant   206 --SSYENQYVRAYDGFKVLRLPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHI 268

  Fly   289 -QLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVV 352
             ..|.:||:.::    ||.::.....:..||:.|||..:                       ::.
plant   269 PTYRDELEKFRI----PKFKIEFGFSVTSVLDRLGLRSM-----------------------SMY 306

  Fly   353 QSGLLELQEDGGNADDSFSFGDLF--------RRALPLVINHPFFYAIGNGK--TLLLSGHIVD 406
            ....:|:.|:|..|..:.:.||..        .:.:..|.:|||.:.|...|  |:|..|.|.|
plant   307 HKACVEIDEEGAEAAAATADGDCGCSLDFVEPPKKIDFVADHPFLFLIREEKTGTVLFVGQIFD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 76/385 (20%)
SRP3NP_176586.1 serpinP_plants 8..371 CDD:381001 78/389 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.