DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpind1

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_077358.1 Gene:Serpind1 / 79224 RGDID:619854 Length:479 Species:Rattus norvegicus


Alignment Length:387 Identity:85/387 - (21%)
Similarity:158/387 - (40%) Gaps:45/387 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQAL---ELTHASHPKLAVQD 100
            |.|....|...|..| |:.::|:.|..|:.::......|...::...|   :..:|| .|..|..
  Rat   115 FNLYRVLKDQATSSD-NIFIAPVGISTAMGMISLGLRGETHEEVHSVLHFKDFVNAS-SKYEVTT 177

  Fly   101 FETL---LTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQ 162
            ...|   ||........|..|:.::|||.|::|.  .|.:|:. |.|          |.....||
  Rat   178 IHNLFRKLTHRLFRRNFGYTLQSVNDLYIQKQFP--IREDFKA-AMR----------EFYFAEAQ 229

  Fly   163 DINY---AFLSRSNFSLGELVSAPQLESL--AEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFF 222
            :.::   ||:|::|..:.:|......|:|  .:..|..:.::.:.|:..|...|....|.:.||.
  Rat   230 EADFSDPAFISKANSHILKLTKGLIKEALENTDSATQMMILNCIYFKGAWMNKFPVEMTHNHNFR 294

  Fly   223 AGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDL 287
            ........|..|..:..:..|....||..::::.: ...:.||||.|.:..|:..||.:|....:
  Rat   295 LNEREVVKVSMMQTKGNFLAANDQELDCDILQLEY-VGGISMLIVIPRKLSGMKTLEAQLTPQVV 358

  Fly   288 HQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVV 352
            .:.:..:..|...:.|||.::..:.:|..||:.:|:.|||....::|.:     |.....:....
  Rat   359 ERWQKSMTNRTREVLLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMSGI-----SDQRIIIDLFK 418

  Fly   353 QSGLLELQEDGGNADDSFSFGDLFRRALPL------VINHPFFYAIGNGKT--LLLSGHIVD 406
            ....:.:.|:|..|....:.|     .:||      .::.||.:.:...:|  ||..|.:.:
  Rat   419 HQSTITVNEEGTQAAAVTTVG-----FMPLSTQVRFTVDRPFLFLVYEHRTSCLLFMGRVAN 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 85/387 (22%)
Serpind1NP_077358.1 serpinD1_HCF2 33..479 CDD:381004 85/387 (22%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 55..79
Glycosaminoglycan-binding site. /evidence=ECO:0000250 172..192 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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