DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ad and si:ch211-186e20.7

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_021329695.1 Gene:si:ch211-186e20.7 / 566630 ZFINID:ZDB-GENE-110407-6 Length:410 Species:Danio rerio


Alignment Length:443 Identity:98/443 - (22%)
Similarity:164/443 - (37%) Gaps:94/443 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVGLAIAL-----TL---PVDGELLARSPASVS-SNRFGLRLTTKLGLTQPD---ANVVVSPLLI 63
            :.|.||.:     ||   |:..:|    |:.:: :|.|...|..:: :..||   .|:..||..:
Zfish    10 IFGFAIVVCGNQETLQQPPISAKL----PSLINMNNDFAFHLYKRV-IESPDYQSKNIFFSPFSV 69

  Fly    64 QAALSLLYAESSSEYGSQLRQALEL------THASHPKLAVQDFETLLTDLKQSAA----IGCRL 118
            ..|||.|...:..:...||...:..      |...|     |.|.:||.|:.....    :|..|
Zfish    70 SIALSELSLGAGGDTKQQLLSGIGYNSTTFSTEEMH-----QLFHSLLEDIGNRTGVDIDVGTAL 129

  Fly   119 ----------RLLSDL---YAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLS 170
                      :.|.|:   |....||.:||.: ||:                   .|..|||   
Zfish   130 YASDRFKPHSKFLEDMKEFYHSDGFTVDFRVK-ETV-------------------DQINNYA--- 171

  Fly   171 RSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMF 235
             ...:.|:...|  ::.|.|....|| ::.:.|:..|...|.|.:|:...|.........|..| 
Zfish   172 -KKKTQGKFNQA--VDDLEEDTLMFL-LTYIYFKGKWDKPFKPEKTRESTFHIDDKTTVPVQMM- 231

  Fly   236 GQHRYRYAEVPALDAQLIEVPFATADLR----MLIVFPN---RPDGLAQLERKLAQSDLHQLRSQ 293
              |:|...:| ..||:| .......|.:    |.:..|:   ....:..||..:::....:.|..
Zfish   232 --HQYERLKV-FYDAEL-STKVLCLDYKDSFSMFLAVPDDKMEHKNIKDLEMTVSRQHFEKWRRS 292

  Fly   294 LEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLE 358
            ..::.|.:.:|||.:.....||.:|:.:|:|.:|:.:.:.:.|     |.....:..|:....|:
Zfish   293 AFKKTVDIYVPKLSLKTSYSLKDILKGMGMADMFSDKANFTGV-----SEEKIFVSKVLHKATLD 352

  Fly   359 LQEDGGNADDSFSFGDLFRRALPLVI---NHPF--FYAIGNGKTLLLSGHIVD 406
            :.|.|..|..........|...||.|   |.||  |........:|..|.:|:
Zfish   353 IDEQGTTAAAVTGVSMRVRLHNPLSILKFNRPFMVFITDQTNDNILFFGKVVN 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 89/407 (22%)
si:ch211-186e20.7XP_021329695.1 alpha-1-antitrypsin_like 39..403 CDD:239011 89/406 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.