DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ad and Spn77Bb

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:213 Identity:59/213 - (27%)
Similarity:94/213 - (44%) Gaps:14/213 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 VSGVT---FRAPWAWAFDPTETQSINFFAGGNRPR-LVDAMFGQHRYRYA-EVPALDAQLIEVPF 257
            |.|:|   |:|.|.:.||.::|:...|:..|..|. .|:.|....:|.|. .|..|.|.::|:||
  Fly   142 VLGITVSYFKAKWKYPFDKSQTKVEQFYNDGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELPF 206

  Fly   258 ATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQLE----ERKVALTLPKLRVLVHSDLKHVL 318
            ...:|.|:::.|....|:..:..:|....||:|..:||    |..|.:.|||........|:..:
  Fly   207 GEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDTV 271

  Fly   319 EELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDG-GNADDSFSFGDLFRRALPL 382
            .:.||..|......|.::..:|....| .|....|...:.:.|:| .||....|.|   :..:..
  Fly   272 YDAGLTDLRNDFADLDKLLIAIGHRGA-CLTLYHQFARIVVDEEGLPNAVPQKSSG---KNNIKF 332

  Fly   383 VINHPFFYAIGNGKTLLL 400
            .:|.||.|.:...|..||
  Fly   333 HVNRPFAYLVLQKKHKLL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 59/213 (28%)
Spn77BbNP_649206.1 SERPIN 13..356 CDD:238101 59/213 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446319
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

Return to query results.
Submit another query.