DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpinb1c

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:399 Identity:92/399 - (23%)
Similarity:178/399 - (44%) Gaps:58/399 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHAS--HPK 95
            |.::|.|.|.|...|..:.|..|.:.||:.|.:||:::|..:.....:||.:.|....|.  |  
Mouse    38 SSANNLFALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHFDSAEDIH-- 100

  Fly    96 LAVQDFETLLTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEF-----ETLAARMGVGCHRLSWE 155
               ..|::|..::.:..| ...|:|.:.||.::  |:||..|:     :|.:|.:.:    :.::
Mouse   101 ---SQFQSLTAEVSKRGA-SHTLKLANRLYGEK--TYNFLPEYLASIQKTYSADLAL----VDFQ 155

  Fly   156 SAS-NAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSI 219
            .|| :|.::||.....::...:.||.:...::|:    |..:.|:...|:..|...|...:|...
Mouse   156 HASEDARKEINQWVKGQTEEKIQELFAVGVVDSM----TKLVLVNATYFKGMWQKKFMARDTTDA 216

  Fly   220 NFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFP----NRPDGLAQLER 280
            .|.......:.|..|:.::...:..:|.|..:::|:|:...:|.|:|:.|    :...||.::|:
Mouse   217 PFRLSKKVTKTVKMMYLKNNLPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEK 281

  Fly   281 KLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSA 345
            :|....|.:..: |:...|.:.|||.::.....|...|.:||:..||:|    |:...|.:|.|.
Mouse   282 QLTLEKLQECEN-LQNIDVCVKLPKFKMEESYILNSNLGQLGVQDLFSS----SKADLSGMSGSR 341

  Fly   346 PP-LGAVVQSGLLELQEDGGNADDSFSFGDLFRRALP------------LVINHPFFYAIGNGKT 397
            .. :..:|....:|:.|:|...|          .|:|            ..::|||.:.|.:..|
Mouse   342 DLFISKIVHKSYVEVNEEGTETD----------AAMPGTVVGCCLMPMEFTVDHPFLFFIRHNPT 396

  Fly   398 --LLLSGHI 404
              :|..|.:
Mouse   397 AHVLFLGRV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 91/395 (23%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 92/399 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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