DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpinb6b

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_038951899.1 Gene:Serpinb6b / 364705 RGDID:1310452 Length:388 Species:Rattus norvegicus


Alignment Length:396 Identity:97/396 - (24%)
Similarity:179/396 - (45%) Gaps:51/396 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHAS--- 92
            |...::..|...|...|| .....||:.|||.|.:.|::::..:......|:.|||.|...|   
  Rat     3 PLLEANGTFAFNLLKTLG-EDSSKNVLFSPLSISSGLAMVFMGAKGTTAHQMIQALSLDKCSGRG 66

  Fly    93 ----HPKLAVQDFETLLTDLKQSAAIGCR--LRLLSDLYAQQRFTF--NFRN--------EFETL 141
                |     |.|::||..:.::   |.:  |:..:.|:.::.|..  :|::        |.|.|
  Rat    67 SRDVH-----QGFQSLLAKVNKT---GTQYLLKTANRLFGEKTFDILASFKDACRKFYEAEMEEL 123

  Fly   142 -------AARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVS 199
                   .:|.    |..:|.:.....|.|:..:.|:...:  ||:|:..:.:    |||.:.|:
  Rat   124 DFKGAPEQSRQ----HINTWVAKKTEGQSISLNWNSQKKIT--ELLSSGSVNA----NTPLVLVN 178

  Fly   200 GVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRM 264
            .:.|:..|...|:..:||.:.|....|..:.|..||.:..::...|..:...::.:|:...:|.|
  Rat   179 AIYFKGNWKKQFNKEDTQEMPFKVTKNEEKPVKMMFKKSTFKMTYVEEISTTILLLPYVGNELNM 243

  Fly   265 LIVFPNRPDGLAQLERKLAQSDLHQLRS--QLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLF 327
            :|:.|:....|..:|:::......:..|  ::|||:|.:.|||.::..:.|:|.||..||:...|
  Rat   244 IIMLPDEHIELRMVEKEITYKKFIEWTSLDKMEEREVEVFLPKFKLEENHDMKDVLHRLGMTDAF 308

  Fly   328 TSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNADDSFSFGDLFRRALP-LVINHPFFYA 391
              |..::: ||.|.|.....|..|:....:|:.|:|..|..:.:....||..:| ...||||.:.
  Rat   309 --EQGMAD-FSGIASKEGLFLSKVIHKSFVEVNEEGTEAAAATAANVTFRCMVPYFCANHPFLFF 370

  Fly   392 IGNGKT 397
            |.:.:|
  Rat   371 IQHSRT 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 96/392 (24%)
Serpinb6bXP_038951899.1 serpin 1..388 CDD:422956 97/396 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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