DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpinc1

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:469 Identity:102/469 - (21%)
Similarity:185/469 - (39%) Gaps:97/469 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLSALLVG----------------LAIALTLPVDGELLARSPA---------------------- 32
            |||.||:|                :|....:||:...:.||||                      
  Rat    18 LLSLLLIGALGCAVCHGNPVDDICIAKPRDIPVNPMCIYRSPAKKATEEDVLEQKVPEATNRRVW 82

  Fly    33 --SVSSNRFGLRLTTKLGLTQPD-ANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHP 94
              |.:::||.......|..::.| .|:.:|||.|..|.::....:.:   :.|:|.:|       
  Rat    83 ELSKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACN---NTLKQLME------- 137

  Fly    95 KLAVQDFETLLTDLKQS-----AAIGCRL--------RLLS--DLYAQQRFTFN--FRNEFETLA 142
               |..|:|:.......     |.:.|||        .|:|  .|:..:..|||  :::..|.: 
  Rat   138 ---VFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLTFNESYQDVSEIV- 198

  Fly   143 ARMGVGCHRLSW-ESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAP 206
              .|.....|.: |:...:...||....:::...:.:::....::.|    |..:.|:.:.|:..
  Rat   199 --YGAKLQPLDFKENPEQSRVTINNWVANKTEGRIKDVIPQGAIDEL----TALVLVNTIYFKGL 257

  Fly   207 WAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNR 271
            |...|.|..|:...|.....:..||..|:.:.:::|..| ....|::|:||...|:.|:::.|..
  Rat   258 WKSKFSPENTRKEPFHKVDGQSCLVPMMYQEGKFKYRRV-GEGTQVLEMPFKGDDITMVLILPKP 321

  Fly   272 PDGLAQLERKLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVH---- 332
            ...||::|::|....|.:...:|.|..:.:.:|:.|:.....||..|:::||..||:.|..    
  Rat   322 EKSLAKVEQELTPELLQEWLDELSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPG 386

  Fly   333 -LSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNADDSFSFGDLFRRALPLVI----NHPFFYAI 392
             ::|....:..|.|      .....||:.|:|..|..|.|.....|...|..:    |.||...|
  Rat   387 IIAEGRDDLFVSDA------FHKAFLEVNEEGSEAAASTSVVITGRSLNPSRVTFKANRPFLVLI 445

  Fly   393 GNG--KTLLLSGHI 404
            ...  .|::..|.:
  Rat   446 REVALNTIIFMGRV 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 88/401 (22%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 89/416 (21%)

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