DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpinb3

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:391 Identity:94/391 - (24%)
Similarity:167/391 - (42%) Gaps:34/391 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHA-------- 91
            ::.:|.|.|..:  |...:.|:..|||.|..||::|...:......|:.:||:|:..        
  Rat     7 ATTQFTLELYRQ--LRDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKPKEKS 69

  Fly    92 --SHPKLAV-QDFETLLTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLS 153
              ||.:..| :.|..::..|.:|.. ...|:..:.:|..:.|.| .:...|.:..........|.
  Rat    70 ADSHDEENVHEQFRKIMNQLNKSNG-AYDLKSPNSIYGAKGFPF-LQTFMEDIKKYYQANVESLD 132

  Fly   154 WESASNAAQ-DINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQ 217
            :..|:..:| .||....:::|..:.:|.....|.|    :|..:.|:.|.|:..|...||...|:
  Rat   133 FAHAAEESQKKINSWVENKTNGKIKDLFPRGSLNS----STILVLVNAVYFKGQWNHKFDEQRTR 193

  Fly   218 SINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKL 282
            ...|:...|..:.|..|...:.:.:..:..:.|:::|:|:...:|.|.|:.|...|||.:||.||
  Rat   194 EDKFWLNKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKL 258

  Fly   283 AQSDLHQLRSQLEER--KVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSA 345
            :...|....|....|  ::.|:||:.:|....||...||.:|:...|..:   ...||.:.|:..
  Rat   259 SADTLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQ---KADFSGMSSTKG 320

  Fly   346 PPLGAVVQSGLLELQEDGGNADDSFSFGDLFR-----RALPLVINHPF--FYAIGNGKTLLLSGH 403
            ..:..|:....||:.|:|  |:.:.:.|...|     |......|.||  |....|..::|..|.
  Rat   321 LVVSKVLHKSFLEVNEEG--AEAAAATGVETRILSAPRTTEFTCNRPFIVFIKPNNTNSILFFGR 383

  Fly   404 I 404
            :
  Rat   384 V 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 94/391 (24%)
Serpinb3NP_001382662.1 serpin 1..387 CDD:476815 94/391 (24%)

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