DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ad and LOC299277

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:LOC299277 / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:430 Identity:100/430 - (23%)
Similarity:165/430 - (38%) Gaps:96/430 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLVGLAIALTLPV-----DGELLARSP-----------------ASVSSNRFGLRLTTKLGLTQP 52
            :::|:..|:..|.     || .|.|.|                 ||:::: |...|..:|.|..|
  Rat     5 VVLGIITAVICPAALCCRDG-TLGRHPEVQKDQDTKKQLDSGTLASINTD-FAFSLYKELALKNP 67

  Fly    53 DANVVVSPLLIQAALSLLYAESSSEYGSQLRQALE-----LTHASHPKLAVQDFETLLTDLKQSA 112
            :.|:..|||.|.|||:.|   |....|:.|::.||     ||..:...:. |::..||..|.|..
  Rat    68 NKNIAFSPLSISAALASL---SLGAKGNTLQEILEGLKFNLTETTEIDIH-QNYRDLLQRLSQPG 128

  Fly   113 AIG--CRLRLL----------------SDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASN 159
            ..|  .|..||                ..||..:.|..:|:...|                    
  Rat   129 GQGQISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCE-------------------- 173

  Fly   160 AAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAG 224
            |.:.||...:.:|...:.|:|:.      .|..|..:.::.:.|...|:..|||.:|....|...
  Rat   174 ARKFINDYVMIQSQGKIKEMVTE------LEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILD 232

  Fly   225 GNRPRLVDAMFGQH---RYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPD--GLAQLERKLAQ 284
            ..||..|..|..:.   .|.:.|  .|...::|:.:......|.|:    ||  .:.|:|..|..
  Rat   233 SRRPVKVLMMKTEDLTTPYFWDE--ELKCTVVELNYKGHGKAMFIL----PDQGKMEQVEASLHP 291

  Fly   285 SDLHQLRSQLEERKV-ALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPL 348
            ..|.:....|:.|.: .|.|||..:.....|:::|.|||:..:|.::..|    |.|..:....:
  Rat   292 GTLRKWTDSLKPRIIDELHLPKFSLSKTYKLENILPELGIMDVFNTQADL----SGIAGAKDVRV 352

  Fly   349 GAVVQSGLLELQEDGGNADDSFSFGDLFRRALPLVINHPF 388
            ..::.:.:|.:.|.|..|:.:......||   |..:|..|
  Rat   353 SQMIHNTVLGMAETGTEAEATTRVEYNFR---PAKLNDTF 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 90/383 (23%)
LOC299277XP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 92/397 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.