DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina3j

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:Serpina3j / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:430 Identity:100/430 - (23%)
Similarity:165/430 - (38%) Gaps:96/430 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLVGLAIALTLPV-----DGELLARSP-----------------ASVSSNRFGLRLTTKLGLTQP 52
            :::|:..|:..|.     || .|.|.|                 ||:::: |...|..:|.|..|
  Rat     5 VVLGIITAVICPAALCCRDG-TLGRHPEVQKDQDTKKQLDSGTLASINTD-FAFSLYKELALKNP 67

  Fly    53 DANVVVSPLLIQAALSLLYAESSSEYGSQLRQALE-----LTHASHPKLAVQDFETLLTDLKQSA 112
            :.|:..|||.|.|||:.|   |....|:.|::.||     ||..:...:. |::..||..|.|..
  Rat    68 NKNIAFSPLSISAALASL---SLGAKGNTLQEILEGLKFNLTETTEIDIH-QNYRDLLQRLSQPG 128

  Fly   113 AIG--CRLRLL----------------SDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASN 159
            ..|  .|..||                ..||..:.|..:|:...|                    
  Rat   129 GQGQISRANLLFVEKHLQILNGFKEKAKALYQTEVFATDFQQTCE-------------------- 173

  Fly   160 AAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAG 224
            |.:.||...:.:|...:.|:|:.      .|..|..:.::.:.|...|:..|||.:|....|...
  Rat   174 ARKFINDYVMIQSQGKIKEMVTE------LEERTSIVMLNFLLFTGQWSVPFDPDDTFMGKFILD 232

  Fly   225 GNRPRLVDAMFGQH---RYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPD--GLAQLERKLAQ 284
            ..||..|..|..:.   .|.:.|  .|...::|:.:......|.|:    ||  .:.|:|..|..
  Rat   233 SRRPVKVLMMKTEDLTTPYFWDE--ELKCTVVELNYKGHGKAMFIL----PDQGKMEQVEASLHP 291

  Fly   285 SDLHQLRSQLEERKV-ALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPL 348
            ..|.:....|:.|.: .|.|||..:.....|:::|.|||:..:|.::..|    |.|..:....:
  Rat   292 GTLRKWTDSLKPRIIDELHLPKFSLSKTYKLENILPELGIMDVFNTQADL----SGIAGAKDVRV 352

  Fly   349 GAVVQSGLLELQEDGGNADDSFSFGDLFRRALPLVINHPF 388
            ..::.:.:|.:.|.|..|:.:......||   |..:|..|
  Rat   353 SQMIHNTVLGMAETGTEAEATTRVEYNFR---PAKLNDTF 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 90/384 (23%)
Serpina3jXP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 92/397 (23%)

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