DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina3m

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:448 Identity:110/448 - (24%)
Similarity:181/448 - (40%) Gaps:87/448 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSALLVGLAIALTLPVDG----------------ELLARSPASVSSNRFGLRLTTKLGLTQPDAN 55
            |..|:.|:..|:....||                :|.:.:..|:::: |...|...|.|..||.|
  Rat     7 LGLLMAGICPAVLGFPDGTLGNDTLLHKDQDKGTQLDSLTLESINTD-FAFSLYKMLALKNPDKN 70

  Fly    56 VVVSPLLIQAALSLLYAESSSEYGSQLRQALE-----LTHASHPKLAVQDFETLLTDLKQ----- 110
            ||.|||.|.|||:::   |....|:.|.:.||     ||.:....:. |.|..||..|.|     
  Rat    71 VVFSPLSISAALAIV---SLGAKGNTLEEILEVLRFNLTESYETDIH-QGFGHLLQRLSQPGDQV 131

  Fly   111 ------SAAIGCRLRLLSD-------LYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQ 162
                  :..|...|::|::       ||..:.||.:|:....|         .:|          
  Rat   132 KIITGNALFIDKNLQVLAEFQEKTRALYQVEAFTADFQQPRVT---------EKL---------- 177

  Fly   163 DINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNR 227
             ||....:::...:.||||.      .:..|..:.|:.:.||..|...|||..|....|:....|
  Rat   178 -INDYVRNQTQGKIQELVSG------LKERTSMVLVNYLLFRGKWKVPFDPDYTFESEFYVDEKR 235

  Fly   228 PRLVDAM-FGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLR 291
            ...|..| ..:....|.....|...::|:.: |.:...|.:.|:: ..:.|:|..|....|.:.:
  Rat   236 SVKVSMMKIEELTTPYFRDEELSCSVLELKY-TGNSSALFILPDK-GRMQQVEASLQPETLKKWK 298

  Fly   292 SQLEERKV-ALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGA--VVQ 353
            ..|..||: .|.||:|.:.....|:.||.|||:..:|:.:..||.:      :.|..|..  ||.
  Rat   299 DSLRPRKIDELYLPRLSISTDYSLEEVLPELGIRDVFSQQADLSRI------TGAKDLSVSQVVH 357

  Fly   354 SGLLELQEDGGNADDSFSFGDLFRRALPLVI---NHPFFYAIG--NGKTLLLSGHIVD 406
            ..:|::.|.|..|..:.....:.|...|.:|   |.||..|:.  :|:|:|....:::
  Rat   358 KVVLDVNETGTEAAAATGANLVPRSGRPPMIVWFNRPFLIAVSHTHGQTILFMAKVIN 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 102/400 (26%)
Serpina3mNP_001257911.1 SERPIN 56..416 CDD:214513 101/398 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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