DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina3b

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:426 Identity:98/426 - (23%)
Similarity:156/426 - (36%) Gaps:129/426 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALE--------- 87
            ||:::: |......:|.|..|..|:..||..|..||:.|   :....|:.|.:.||         
Mouse    48 ASINTD-FAFSFYKELALKNPHKNIAFSPFGIATALNSL---TLGAKGNTLEEILEVLKFNLTET 108

  Fly    88 ------------LTHASHP----------KLAVQDFETLLTDLKQSAAIGCRLRLLSDLYAQQRF 130
                        |...|||          .|.|:....:|.:.|:.|..         ||..:.|
Mouse   109 SEADIHQGFKHLLQRLSHPGDQVQIRTGNALFVEKHLQILAEFKEKARA---------LYHTEVF 164

  Fly   131 TFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPF 195
            |.||:...|                    |.:.||....:::...:.||||.      .:.||..
Mouse   165 TANFQQPHE--------------------AMKLINSYMSNQTQGKIKELVSD------MDGNTSM 203

  Fly   196 LHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVP-FAT 259
            :.|:.:.|:|.|...|:..:|....|        :||      |.|:.:||.:..:.:..| |..
Mouse   204 VIVNDLFFKAEWMVPFNSDDTFMGKF--------IVD------RSRHVKVPMMKTKNLRTPYFRD 254

  Fly   260 ADLRMLIVFPN----------RPD--GLAQLERKLAQSDLHQLRSQLEERKV-ALTLPKLRVLVH 311
            .:|:..:|..|          .||  .:.|:|..|....|.:.|..|..||: .|.|||..:..|
Mouse   255 EELKCTVVELNYKGNGKAMFILPDQGKMQQVEASLQPGTLKKWRKSLRPRKIKELHLPKFSLSQH 319

  Fly   312 SDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNAD--------- 367
            .:|:.:|.|||:.:||:::..|    |.|.......:..::.|..|::.|.|...|         
Mouse   320 YNLEDILPELGIRELFSTQADL----SGITGVKNITVSEMIHSTELDMTEKGTEGDAITIVGYNF 380

  Fly   368 -------------DSFSF-----GDLFRRALPLVIN 385
                         |.|.:     |||:...:..|||
Mouse   381 MSAKLKPVFVKFEDQFLYIVLDQGDLWIHVMGKVIN 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 96/423 (23%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 93/419 (22%)
RCL 367..392 2/24 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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