DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina3n

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:434 Identity:104/434 - (23%)
Similarity:180/434 - (41%) Gaps:74/434 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSALLVGLAIALTLPVD---GE-------------LLARSPASVSSNRFGLRLTTKLGLTQPDAN 55
            |..|:.|:..||....|   ||             |.:.:.||:::: |...|..||.|..||.|
  Rat     7 LELLMAGIGSALLCFPDCILGEDTLFHEDQDKGTQLDSLTLASINTD-FAFSLYKKLALRNPDKN 70

  Fly    56 VVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHPKLAV-QDFETLLTDLKQ--------- 110
            ||.|||.|.|||:::...:......::.:.|:......|:..: :.|..||..|.|         
  Rat    71 VVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETPETEIHRGFGHLLQRLSQPRDEIQIST 135

  Fly   111 --SAAIGCRLRLLSD-------LYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINY 166
              :..|..||::|::       ||..:.||.:|:...|                    |.:.||.
  Rat   136 GNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSRE--------------------AKKLIND 180

  Fly   167 AFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLV 231
            ....::...:..|::     :||: .|..:.|:.:.|:..|...|||.:|....|::|..||..|
  Rat   181 YVSKQTQGKIQGLIT-----NLAK-KTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPVKV 239

  Fly   232 DAM-FGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQLE 295
            ..| .......|.....|:..::|:.: |.:...|.:.|:: ..:.|:|..|....|.:.:..|.
  Rat   240 PMMKLEDLTTPYVRDEELNCTVVELKY-TGNASALFILPDQ-GKMQQVEASLQPETLRRWKDSLR 302

  Fly   296 ERKV-ALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLEL 359
            ...: .|.|||..:....:|:.||.|||:.::|:::..|    |.|.......:..||...:|::
  Rat   303 PSMIDELYLPKFSISADYNLEDVLPELGIKEVFSTQADL----SGITGDKDLMVSQVVHKAVLDV 363

  Fly   360 QEDG--GNADDSFSFGDLFRRALPLVI--NHPFFYAIGNGKTLL 399
            .|.|  ..|.....|..:..:..||:|  :.||...|.:.:|.:
  Rat   364 AETGTEAAAATGVKFVPMSAKLDPLIIAFDRPFLMIISDTETAI 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 93/390 (24%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 96/404 (24%)
RCL 367..394 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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