DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina1

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_071964.2 Gene:Serpina1 / 24648 RGDID:3326 Length:411 Species:Rattus norvegicus


Alignment Length:403 Identity:92/403 - (22%)
Similarity:167/403 - (41%) Gaps:56/403 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RSPA--SVSSN--RFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELT 89
            :||.  .:|||  .|...|..:|......:|:..||:.|..|.::|...|..:...|:.:.||..
  Rat    37 QSPTYRKISSNLADFAFSLYRELVHQSNTSNIFFSPMSITTAFAMLSLGSKGDTRKQILEGLEFN 101

  Fly    90 HASHPKLAV-QDFETLLTDLKQSAA-----IGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVG 148
            ....|:..: :.|..||..|.:..:     .|..|.:..:|...::|....:|.:.:.|      
  Rat   102 LTQIPEADIHKAFHHLLQTLNRPDSELQLNTGNGLFVNKNLKLVEKFLEEVKNNYHSEA------ 160

  Fly   149 CHRLSWESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDP 213
             ..:::..:..|.:.|| .::.:.  :.|::|   .|....:.:|.|..|:.:.|:..|...|:|
  Rat   161 -FSVNFADSEEAKKVIN-DYVEKG--TQGKIV---DLMKQLDEDTVFALVNYIFFKGKWKRPFNP 218

  Fly   214 TETQSINFFAGGNRPRLVDAM--FGQHRYRYAEVPALDAQLIEVPF---ATADLRMLIVFPNRPD 273
            ..|:..:|....:....|..|  .|.....|..  .|.:.::.:.:   |||    :.:.|:  |
  Rat   219 EHTRDADFHVDKSTTVKVPMMNRLGMFDMHYCS--TLSSWVLMMDYLGNATA----IFLLPD--D 275

  Fly   274 GLAQ-LERKLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVF 337
            |..| ||:.|.:..:.:.....:.|...|..|||.:....:||.:|..||:.::|.::..||.: 
  Rat   276 GKMQHLEQTLTKDLISRFLLNRQTRSAILYFPKLSISGTYNLKTLLSSLGITRVFNNDADLSGI- 339

  Fly   338 SSILSSSAP-PLGAVVQSGLLELQEDGGNADDSFSFGDLFRRALPLVI------NHPFFYAIGNG 395
                :..|| .|...|...:|.|.|.|..|     .|.....|:|:.:      :|||.:.|...
  Rat   340 ----TEDAPLKLSQAVHKAVLTLDERGTEA-----AGATVVEAVPMSLPPQVKFDHPFIFMIVES 395

  Fly   396 KTL--LLSGHIVD 406
            :|.  |..|.::|
  Rat   396 ETQSPLFVGKVID 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 89/391 (23%)
Serpina1NP_071964.2 alpha-1-antitrypsin_like 49..406 CDD:239011 86/387 (22%)
RCL 367..386 3/18 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

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