DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina3n

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_033278.2 Gene:Serpina3n / 20716 MGIID:105045 Length:418 Species:Mus musculus


Alignment Length:436 Identity:108/436 - (24%)
Similarity:184/436 - (42%) Gaps:82/436 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSALLVGLAIAL------TLPVDG----------ELLARSPASVSSNRFGLRLTTKLGLTQPDAN 55
            |..|:.|:..|:      ||.:|.          :|.:.:.||:::: |...|..:|.|..||.|
Mouse     7 LGLLMAGICPAVLCFPDGTLGMDAAVQEDHDNGTQLDSLTLASINTD-FAFSLYKELVLKNPDKN 70

  Fly    56 VVVSPLLIQAALSLLYAESSSEYGSQLRQALE-----LTHASHPKLAVQDFETLLTDLKQ----- 110
            :|.|||.|.|||:::   |....|:.|.:.||     ||..|...:. |.|..||..|.|     
Mouse    71 IVFSPLSISAALAVM---SLGAKGNTLEEILEGLKFNLTETSEADIH-QGFGHLLQRLNQPKDQV 131

  Fly   111 ------SAAIGCRLRLLSD-------LYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQ 162
                  :..|..|.::|::       ||..:.||.:|                    :....|.:
Mouse   132 QISTGSALFIEKRQQILTEFQEKARALYQAEAFTADF--------------------QQPRQAKK 176

  Fly   163 DINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNR 227
            .||.....::...:.||||.      .:..|..:.|:.:.|:|.|...|||.:|....|:||..|
Mouse   177 LINDYVRKQTQGMIKELVSD------LDKRTLMVLVNYIYFKAKWKVPFDPLDTFKSEFYAGKRR 235

  Fly   228 PRLVDAMFGQH-RYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLR 291
            |.:|..|..:. ...|.....|...::|:.: |.:...:.:.|:: ..:.|:|..|....|.:.:
Mouse   236 PVIVPMMSMEDLTTPYFRDEELFCTVVELKY-TGNASAMFILPDQ-GKMQQVEASLQPETLRKWK 298

  Fly   292 SQLEERKV-ALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSG 355
            :.|:.|.: .|.|||..:.....|:.||.:||:.::|:::..|    |:|..:....:..||...
Mouse   299 NSLKPRMIDELHLPKFSISTDYSLEDVLSKLGIREVFSTQADL----SAITGTKDLRVSQVVHKA 359

  Fly   356 LLELQEDG--GNADDSFSFGDLFRRALPLVI--NHPFFYAIGNGKT 397
            :|::.|.|  ..|.....|..:..:..||.:  |.||...|.:.:|
Mouse   360 VLDVAETGTEAAAATGVKFVPMSAKLYPLTVYFNRPFLIMIFDTET 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 98/392 (25%)
Serpina3nNP_033278.2 serpinA3_A1AC 37..418 CDD:381019 101/406 (25%)
RCL 367..392 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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