DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina1d

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_033272.1 Gene:Serpina1d / 20703 MGIID:891968 Length:413 Species:Mus musculus


Alignment Length:434 Identity:98/434 - (22%)
Similarity:179/434 - (41%) Gaps:58/434 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IHWRLLSALLVGLAIAL-------TLPVDGELLARSPAS--VSSN--RFGLRLTTKLGLTQPDAN 55
            |.|.||  ||.||...:       ....|.....:||||  :::|  .|.|||..:|......:|
Mouse     5 ISWSLL--LLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFALRLYRELVHQSNTSN 67

  Fly    56 VVVSPLLIQAALSLLYAESSSEYGSQLRQALE--LTHASHPKLAVQDFETLLTDLKQ-----SAA 113
            :..||:.|..|.::|...|..:..:|:.:.|:  ||..|...:. :.|:.||..|.:     ..:
Mouse    68 IFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIH-KSFQHLLQTLNRPDSELQLS 131

  Fly   114 IGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGE 178
            .|..|.:.:||...::|....:|.::       .....:::..:..|.:.|| .|:.:.  :.|:
Mouse   132 TGNGLFVNNDLKLVEKFLEEAKNHYQ-------AEVFSVNFAESEEAKKVIN-DFVEKG--TQGK 186

  Fly   179 LVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYA 243
            :|.|  ::.| :.:|.|...:.:.|:..|...|||..|:...|....:....|..|.........
Mouse   187 IVEA--VKKL-DQDTVFALANYILFKGKWKQPFDPENTEEAEFHVDESTTVKVPMMTLSGMLDVH 248

  Fly   244 EVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQ-LERKLAQSDLHQLRSQLEERKVALTLPKLR 307
            ....|.:.::.:.:| .:...:.:.|:  ||..| ||:.|.:..:.|...........:.:|:|.
Mouse   249 HCSMLSSWVLLMDYA-GNTTAVFLLPD--DGKMQHLEQTLNKELISQFLLNRRRSDAQIHIPRLS 310

  Fly   308 VLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAP-PLGAVVQSGLLELQEDGGNAD---- 367
            :..:.:||.::..||:.::|.:...|    |.|...:|| .|...|...:|.:.|.|..|.    
Mouse   311 ISGNYNLKTLMSPLGITRIFNNGADL----SGITEENAPLKLSKAVHKAVLTIDETGTEAAAATV 371

  Fly   368 ---DSFSFGDLFRRALPLVINHPFFYAIGNGKTL--LLSGHIVD 406
               .::|...:.|      .:|||.:.|....|.  :..|.:||
Mouse   372 LQVATYSMPPIVR------FDHPFLFIIFEEHTQSPIFVGKVVD 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 83/388 (21%)
Serpina1dNP_033272.1 SERPIN 53..410 CDD:214513 83/384 (22%)
RCL 368..387 2/24 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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