DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina1c

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_033271.1 Gene:Serpina1c / 20702 MGIID:891969 Length:413 Species:Mus musculus


Alignment Length:440 Identity:94/440 - (21%)
Similarity:169/440 - (38%) Gaps:70/440 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IHWRLLSALLVGLAIAL-------TLPVDGELLARSPAS--VSSN--RFGLRLTTKLGLTQPDAN 55
            |.|.||  ||.||...:       ....|.....:||||  :::|  .|.:.|..:|......:|
Mouse     5 ISWGLL--LLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFAISLYRELVHQSNTSN 67

  Fly    56 VVVSPLLIQAALSLLYAESSSEYGSQLRQALE--LTHASHPKLAVQDFETLLTDLKQ-----SAA 113
            :..||:.|..|.::|...|..:..:|:.:.|:  ||..|...:. :.|:.||..|.:     ..:
Mouse    68 IFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIH-KSFQHLLQTLNRPDSELQLS 131

  Fly   114 IGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGE 178
            .|..|.:.:||...::|....:|.::.                   ....:|:|....:...:.:
Mouse   132 TGNGLFVNNDLKLVEKFLEEAKNHYQA-------------------EVFSVNFAESEEAKKVIND 177

  Fly   179 LVSAPQLESLAE------HNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQ 237
            .|.......:||      .:|.|...:.:.|:..|...|||..|:...|....:....|..|...
Mouse   178 FVEKGTQGKIAEAVKKLDQDTVFALANYILFKGKWKKPFDPENTEEAEFHVDESTTVKVPMMTLS 242

  Fly   238 HRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQ-LERKLAQSDLHQLRSQLEERKVAL 301
            ..........|.:.::.:.:| .:...:.:.|:  ||..| ||:.|::..:.:...:...|...:
Mouse   243 GMLDVHHCSTLSSWVLLMDYA-GNATAVFLLPD--DGKMQHLEQTLSKELISKFLLKRPRRLAQI 304

  Fly   302 TLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAP-PLGAVVQSGLLELQEDGGN 365
            ..|:|.:....:||.::..||:.::|.:...|    |.|...:|| .|...|...:|.:.|.|..
Mouse   305 HFPRLSISGEYNLKTLMSPLGITRIFNNGADL----SGITEENAPLKLSQAVHKAVLTMDETGTE 365

  Fly   366 ADDS-------FSFGDLFRRALPLVINHPFFYAIGNGKTL--LLSGHIVD 406
            |..:       :|...:.|      .:|||.:.|....|.  |..|.:||
Mouse   366 AAAATVLLAVPYSMPPIVR------FDHPFLFIIFEEHTQSPLFVGKVVD 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 79/394 (20%)
Serpina1cNP_033271.1 SERPIN 53..410 CDD:214513 79/390 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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