DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ad and Serpina16

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_112098.3 Gene:Serpina16 / 194604 MGIID:2684892 Length:440 Species:Mus musculus


Alignment Length:432 Identity:109/432 - (25%)
Similarity:167/432 - (38%) Gaps:63/432 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WRLLSALLVGLAIALTLPVDGELLARSPA------SVSSNRFGLRLTTKLGLTQPDANVVVSPLL 62
            |.||:.|:......:|.|.:....:|:||      ..::.:|.|.|.|:|..::...||:.|||.
Mouse    31 WLLLAVLVPCFGGPVTPPTETSNTSRTPAIQGAPPFFNNQKFALSLYTQLPKSKLGKNVIFSPLS 95

  Fly    63 IQAALSLLYAESSSEYGSQLRQAL--ELTHASHPKLAVQDFETLLTDLKQSAAIGCRLRLL---- 121
            |...|.||..:...|...|:.|.|  .:|.|...|.||| :..||:.|..:...|.....|    
Mouse    96 ITMPLVLLAFQDKPEARRQVLQGLGFGVTGALDAKAAVQ-YGKLLSALLPAEHCGIHTGSLFFID 159

  Fly   122 SDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGEL---VSAP 183
            ..|..|..|.....:.:.:....:..|.|:|       |.:.|:.|...::...:..|   :..|
Mouse   160 KTLKPQTTFLTLANSSYSSDVILISFGNHKL-------AKKQIDLAIKVKTQGKVTRLLRNLKPP 217

  Fly   184 QLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAM--FGQHRYRYAEVP 246
            ....|..:|         .|:..|.:.|:|..|...||........||..|  .|..:.:|  ..
Mouse   218 THLFLTNYN---------LFKGKWKYRFNPKYTGMRNFSLSNGTNILVPMMQKIGWFQLKY--FS 271

  Fly   247 ALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQLEERKVALTLPKLRVLVH 311
            .:.:.::::|| |.::..:...||..| |.:.|:.|.:...:........||..|..||..:.|.
Mouse   272 HIHSYVLQLPF-TCNISGVFFLPNDGD-LKECEKALLEQSFNTWIQPFPLRKRWLFFPKFSIPVA 334

  Fly   312 SDL---KHVLEELGLAKLFTSEVHLSEVFSSILSSSAP-PLGAVVQSGLLELQEDGGNADDSFSF 372
            ..|   |||...|   |||...:.|    |.|....|| .:...|....|.:.|||...|.|.| 
Mouse   335 LQLESFKHVNSSL---KLFNKRMDL----SGITLQKAPLRVTMAVHRAELAVSEDGEGEDVSNS- 391

  Fly   373 GDLFRRALP------LVINHPFFYAIGN--GKTLLLSGHIVD 406
                 |..|      |..|..|...|.:  .|:||..|.:::
Mouse   392 -----RVNPEPGLAALHFNRSFLLLILDEASKSLLFMGRVLN 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 100/391 (26%)
Serpina16XP_112098.3 serpin 61..431 CDD:393296 100/402 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.