DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and srp-8

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:419 Identity:92/419 - (21%)
Similarity:158/419 - (37%) Gaps:100/419 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ELLARSPASVSSNRFGLRLTTKLGLTQPD--ANVVVSPLLIQAALSLLYAESSSEYGSQLRQAL- 86
            |.|::|.|     .|.|:|     |.|.|  .:.|.||:.|..||..||..:..|..||:...| 
 Worm     9 EFLSKSEA-----EFALKL-----LHQQDHSQSFVFSPIAISLALYSLYEAARGETRSQIHDCLF 63

  Fly    87 -------ELTHASHPKLAVQDFETLLTDLKQSAAIG------CRLRLLSD---------LYAQQR 129
                   .:||.|       :..|.|:.:|:...:.      ||..:.::         ||..:.
 Worm    64 KNATDGEMVTHFS-------NVSTALSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEV 121

  Fly   130 FTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTP 194
            .:.:..||.||:..     .::|..|:.....:.||    ::.:....::|              
 Worm   122 SSHDLDNEKETIKT-----INKLIRENTDGHIKKIN----TKISIDKDQVV-------------- 163

  Fly   195 FLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMF--GQHRYRYAEVPALDAQLIEVPF 257
             :.:|...|.|.|...|....|....||...|..|.:..:.  |.:| :|.|....  |::.:|:
 Worm   164 -VFLSAACFEAQWQNKFHKLSTSKKEFFCTANSHRNIKFLHATGANR-KYCENDKF--QVLSLPY 224

  Fly   258 ATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELG 322
            ..:...|.|..|....|||:..:.|..|.:.:|:|.:....|.:.:|..|.....||...|:.:|
 Worm   225 TDSSFEMTIFLPKEQFGLAEALKTLGTSTIQELKSNVSNYLVNVQIPIWRNETEIDLNSTLQAIG 289

  Fly   323 LAKL---------FTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGN-ADDSFSFGDLFR 377
            :.|:         |...||:||               .:...::|:.|:|.: |.::......:|
 Worm   290 ITKILNESAYIGNFAENVHISE---------------FIHKAIIEVNENGTSPATNTKVITKRWR 339

  Fly   378 RAL----PLVINHPFFYAIGNGKTLLLSG 402
            ...    ..:.:|||.|.|....::|..|
 Worm   340 EETGEIRDFIADHPFLYTIHYKNSILFMG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 88/409 (22%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 90/414 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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