DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina12

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_620180.2 Gene:Serpina12 / 191570 RGDID:708485 Length:414 Species:Rattus norvegicus


Alignment Length:422 Identity:103/422 - (24%)
Similarity:175/422 - (41%) Gaps:75/422 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VGLAIALTLPVDGELLAR-------SPASVSSNR--------------FGLRLTTKLGLTQPDAN 55
            :||.:|..|.|.|.|..|       ||..|...|              ||.:|..:|.......|
  Rat     7 LGLFLAGLLTVKGLLQDRDAPDTYESPVRVQEWRGKKDARELTRHNMEFGFKLLQRLASNSRQGN 71

  Fly    56 VVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHAS--------HPKLAVQDFETLLTDLKQSA 112
            :.:|||.|..|.|:|...:.:....::|:.......|        |..|...:.||  .|:|.| 
  Rat    72 IFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSDRDMHMGFHYLLQKLNRET--QDVKMS- 133

  Fly   113 AIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLG 177
             ||..|.:...|..||||....:|.::   |.|.:    .:::...|..::|| .::||...:  
  Rat   134 -IGNALFMDQRLRPQQRFLKLAKNLYD---ADMIL----TNFQDLENTQKNIN-KYISRKTHN-- 187

  Fly   178 ELVSAPQLESLAEH---NTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHR 239
                  ::|::.::   .|..|..:.:.|:..|.:.|||.:|:..:||....:...|..||.:..
  Rat   188 ------RIENMVKNIDPGTVMLLTNYIYFQGRWQYEFDPKQTKEEDFFIEEGKTVKVPMMFQRGM 246

  Fly   240 YRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLH-QLRSQLEERKVALTL 303
            |..|....|...::|:|: ..::....|.|:  .|..:|..:..|:|:. :.:|.|.:|.|.:.:
  Rat   247 YDMAYDSQLSCTILEMPY-RRNITATFVLPD--SGKLRLLEQGLQADIFAKWKSLLSKRVVDVWV 308

  Fly   304 PKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDG--GNA 366
            |:|.:....::|.||..||::|:|.....|:.    |.|..:..:|..|....|.:.|.|  |.|
  Rat   309 PRLHISATYNMKKVLSRLGISKIFEEHGDLTR----ISSHRSLKVGEAVHKAELRMNEKGTEGAA 369

  Fly   367 DDSFSFGDLFRRALP------LVINHPFFYAI 392
            ...       .:.||      :.:|.||...|
  Rat   370 GSG-------AQTLPMETPRRMKLNAPFLMMI 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 93/393 (24%)
Serpina12NP_620180.2 serpinA12_vaspin 40..411 CDD:381026 92/389 (24%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 5/24 (21%)

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