DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn43Ad and Serpine1

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_032897.2 Gene:Serpine1 / 18787 MGIID:97608 Length:402 Species:Mus musculus


Alignment Length:424 Identity:87/424 - (20%)
Similarity:170/424 - (40%) Gaps:53/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSALLVGLAI----ALTLPVDGELLARSPASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAAL 67
            |:.|::||.:    ..|||     |..|..:..:..||:::..::.....|.|||.||..:.:.|
Mouse     7 LACLILGLVLVSGKGFTLP-----LRESHTAHQATDFGVKVFQQVVQASKDRNVVFSPYGVSSVL 66

  Fly    68 SLLYAESSSEYGSQLRQALELTHASHPKLAVQDFETLLTDL-----KQSAAIGCRLRLLSDLYAQ 127
            ::|...::.:...|::.|:..  ..:.|........|..:|     |...:....:.:..||...
Mouse    67 AMLQMTTAGKTRRQIQDAMGF--KVNEKGTAHALRQLSKELMGPWNKNEISTADAIFVQRDLELV 129

  Fly   128 QRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGE--------LVSAPQ 184
            |.|..:|...|:|:                   .:.::::.:.|:.|.:.:        ::|...
Mouse   130 QGFMPHFFKLFQTM-------------------VKQVDFSEVERARFIINDWVERHTKGMISDLL 175

  Fly   185 LESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYAEV---P 246
            .:...:..|..:.|:.:.|...|...|....|....|.........|..|...:::.|.|.   .
Mouse   176 AKGAVDELTRLVLVNALYFSGQWKTPFLEASTHQRLFHKSDGSTVSVPMMAQSNKFNYTEFTTPD 240

  Fly   247 ALDAQLIEVPFATADLRMLIVFPNRPD-GLAQLERKLAQSDLHQLRSQLEERKVALTLPKLRVLV 310
            .|:..::|:|:....|.|.|..|...| .|:.|...|....:.|.:..:......|.|||..:..
Mouse   241 GLEYDVVELPYQGDTLSMFIAAPFEKDVHLSALTNILDAELIRQWKGNMTRLPRLLILPKFSLET 305

  Fly   311 HSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNADDSFSFGDL 375
            ..||:..||:||:..:|::.  |:: |:|:.......:...:|...:|:.|.|..|..|.:|...
Mouse   306 EVDLRGPLEKLGMPDMFSAT--LAD-FTSLSDQEQLSVAQALQKVRIEVNESGTVASSSTAFVIS 367

  Fly   376 FRRA-LPLVINHPFFYAIGNG--KTLLLSGHIVD 406
            .|.| ..:||:..|.:.:.:.  :|:|..|.:::
Mouse   368 ARMAPTEMVIDRSFLFVVRHNPTETILFMGQVME 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 78/388 (20%)
Serpine1NP_032897.2 SERPIN 29..402 CDD:294093 79/397 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.110

Return to query results.
Submit another query.