DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and srp-2

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:389 Identity:91/389 - (23%)
Similarity:164/389 - (42%) Gaps:47/389 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SPASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHP 94
            |..:.|...|.|:|   |.......:||:|||.|...|:|::|.:.   ||..::..::...|. 
 Worm     2 SDNATSQTDFALKL---LATLPHSGSVVLSPLSISLGLALIHAGAC---GSTQKELEDVLGGSR- 59

  Fly    95 KLAVQDFETLL-----TDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSW 154
              ..::|..|:     ||      .|...::::.::..|.:|.: ::..||:..........|.:
 Worm    60 --IFEEFSGLMEAVGDTD------NGVETKIVNRVFVNQAYTIH-QDYLETVEKLYKASGESLDF 115

  Fly   155 ESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSI 219
            .....||:.:|....:.:|..:.:|:.|..    |.:...|| |:.:.|:|.|...|....|...
 Worm   116 SQTEQAAKTMNTFVENHTNGKIKDLIPADS----ANNAFAFL-VNAMYFKADWQSKFAKESTTGR 175

  Fly   220 NFFAGGNRPRLVDAM--FGQHRYRYAEVPALDA--QLIEVPFATADLRMLIVFPNRPDGLAQLER 280
            .||......|.:..:  ..:|| .|.|    |.  |::.:.:|.....:.|..|.:..||.....
 Worm   176 EFFTSEAESRQIPFLTELDEHR-DYTE----DVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALE 235

  Fly   281 KLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSA 345
            |:....:..|.:.|:...|::.:||.::....|||..||.:|:.::|.....||.:...:..||.
 Worm   236 KINGEYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIADKVFISSG 300

  Fly   346 PPLGAVVQSGLLELQEDGGNADDSFSFG---DLFRRALP--LVINHPFFYAI-GNGKTLLLSGH 403
                  :...::|:.|||..|..:.:|.   ::...|.|  .|.:|||.:|: ....||.|..|
 Worm   301 ------IHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLGVH 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 90/385 (23%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 89/382 (23%)

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