DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and srp-2

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:389 Identity:91/389 - (23%)
Similarity:164/389 - (42%) Gaps:47/389 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SPASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHP 94
            |..:.|...|.|:|   |.......:||:|||.|...|:|::|.:.   ||..::..::...|. 
 Worm     2 SDNATSQTDFALKL---LATLPHSGSVVLSPLSISLGLALIHAGAC---GSTQKELEDVLGGSR- 59

  Fly    95 KLAVQDFETLL-----TDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSW 154
              ..::|..|:     ||      .|...::::.::..|.:|.: ::..||:..........|.:
 Worm    60 --IFEEFSGLMEAVGDTD------NGVETKIVNRVFVNQAYTIH-QDYLETVEKLYKASGESLDF 115

  Fly   155 ESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSI 219
            .....||:.:|....:.:|..:.:|:.|..    |.:...|| |:.:.|:|.|...|....|...
 Worm   116 SQTEQAAKTMNTFVENHTNGKIKDLIPADS----ANNAFAFL-VNAMYFKADWQSKFAKESTTGR 175

  Fly   220 NFFAGGNRPRLVDAM--FGQHRYRYAEVPALDA--QLIEVPFATADLRMLIVFPNRPDGLAQLER 280
            .||......|.:..:  ..:|| .|.|    |.  |::.:.:|.....:.|..|.:..||.....
 Worm   176 EFFTSEAESRQIPFLTELDEHR-DYTE----DVLFQVLSLKYADPKFTLAIFLPKQRFGLVDALE 235

  Fly   281 KLAQSDLHQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSA 345
            |:....:..|.:.|:...|::.:||.::....|||..||.:|:.::|.....||.:...:..||.
 Worm   236 KINGEYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFAEGADLSGIADKVFISSG 300

  Fly   346 PPLGAVVQSGLLELQEDGGNADDSFSFG---DLFRRALP--LVINHPFFYAI-GNGKTLLLSGH 403
                  :...::|:.|||..|..:.:|.   ::...|.|  .|.:|||.:|: ....||.|..|
 Worm   301 ------IHKAIIEVDEDGTTAAAASAFKVQLEMMIMAEPTQFVADHPFLFAVLFENHTLFLGVH 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 90/384 (23%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 89/382 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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