DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpind1

DIOPT Version :9

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001317976.1 Gene:Serpind1 / 15160 MGIID:96051 Length:478 Species:Mus musculus


Alignment Length:387 Identity:87/387 - (22%)
Similarity:157/387 - (40%) Gaps:45/387 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQAL---ELTHASHPKLAVQD 100
            |.|....|...|..| |:.::|:.|..|:.::......|...::...|   :..:|| .|..|..
Mouse   114 FNLYRVLKDQATTSD-NLFIAPVGISTAMGMISLGLRGETHEEVHSVLHFRDFVNAS-SKYEVTT 176

  Fly   101 FETL---LTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQ 162
            ...|   ||........|..||.::.||.|::|.  .|.:|:. |.|          |.....||
Mouse   177 IHNLFRKLTHRLFRRNFGYTLRSVNGLYIQKQFP--IREDFKA-AMR----------EFYFAEAQ 228

  Fly   163 DINY---AFLSRSNFSLGELVSAPQLESL--AEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFF 222
            :.|:   ||:|::|..:.:|......|:|  .:..|..|.::.:.|:..|...|....|.:.||.
Mouse   229 EANFPDPAFISKANNHILKLTKGLIKEALENIDPATQMLILNCIYFKGTWVNKFPVEMTHNHNFR 293

  Fly   223 AGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDL 287
            ........|..|..:..:..|....||..::::.: ...:.||||.|.:..|:..||.:|....:
Mouse   294 LNEREVVKVSMMQTKGNFLAANDQELDCDILQLEY-VGGISMLIVVPRKLSGMKTLEAQLTPQVV 357

  Fly   288 HQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVV 352
            .:.:..:..|...:.|||.::..:.:|..||:.:|:.|||....::|.:     |.....:....
Mouse   358 ERWQKSMTNRTREVLLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMSGI-----SDQRIAIDLFK 417

  Fly   353 QSGLLELQEDGGNADDSFSFGDLFRRALPL------VINHPFFYAIGNGKT--LLLSGHIVD 406
            ....:.:.|:|..|....:.|     .:||      .::.||.:.:...:|  ||..|.:.:
Mouse   418 HQSTITVNEEGTQAAAVTTVG-----FMPLSTQVRFTVDRPFLFLVYEHRTSCLLFMGKVTN 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 87/383 (23%)
Serpind1NP_001317976.1 HCII 43..476 CDD:239002 87/387 (22%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 54..78
Glycosaminoglycan-binding site. /evidence=ECO:0000250 171..191 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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