DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpind1

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_032249.3 Gene:Serpind1 / 15160 MGIID:96051 Length:478 Species:Mus musculus


Alignment Length:387 Identity:87/387 - (22%)
Similarity:157/387 - (40%) Gaps:45/387 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 FGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQAL---ELTHASHPKLAVQD 100
            |.|....|...|..| |:.::|:.|..|:.::......|...::...|   :..:|| .|..|..
Mouse   114 FNLYRVLKDQATTSD-NLFIAPVGISTAMGMISLGLRGETHEEVHSVLHFRDFVNAS-SKYEVTT 176

  Fly   101 FETL---LTDLKQSAAIGCRLRLLSDLYAQQRFTFNFRNEFETLAARMGVGCHRLSWESASNAAQ 162
            ...|   ||........|..||.::.||.|::|.  .|.:|:. |.|          |.....||
Mouse   177 IHNLFRKLTHRLFRRNFGYTLRSVNGLYIQKQFP--IREDFKA-AMR----------EFYFAEAQ 228

  Fly   163 DINY---AFLSRSNFSLGELVSAPQLESL--AEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFF 222
            :.|:   ||:|::|..:.:|......|:|  .:..|..|.::.:.|:..|...|....|.:.||.
Mouse   229 EANFPDPAFISKANNHILKLTKGLIKEALENIDPATQMLILNCIYFKGTWVNKFPVEMTHNHNFR 293

  Fly   223 AGGNRPRLVDAMFGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDL 287
            ........|..|..:..:..|....||..::::.: ...:.||||.|.:..|:..||.:|....:
Mouse   294 LNEREVVKVSMMQTKGNFLAANDQELDCDILQLEY-VGGISMLIVVPRKLSGMKTLEAQLTPQVV 357

  Fly   288 HQLRSQLEERKVALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVV 352
            .:.:..:..|...:.|||.::..:.:|..||:.:|:.|||....::|.:     |.....:....
Mouse   358 ERWQKSMTNRTREVLLPKFKLEKNYNLVEVLKSMGITKLFNKNGNMSGI-----SDQRIAIDLFK 417

  Fly   353 QSGLLELQEDGGNADDSFSFGDLFRRALPL------VINHPFFYAIGNGKT--LLLSGHIVD 406
            ....:.:.|:|..|....:.|     .:||      .::.||.:.:...:|  ||..|.:.:
Mouse   418 HQSTITVNEEGTQAAAVTTVG-----FMPLSTQVRFTVDRPFLFLVYEHRTSCLLFMGKVTN 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 87/387 (22%)
Serpind1NP_032249.3 serpinD1_HCF2 32..478 CDD:381004 87/387 (22%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 54..78
Glycosaminoglycan-binding site. /evidence=ECO:0000250 171..191 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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