DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn43Ad and Serpina3a

DIOPT Version :10

Sequence 1:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:400 Identity:85/400 - (21%)
Similarity:153/400 - (38%) Gaps:71/400 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SPASVSSNRFGLRLTTKLGLTQPDANVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHP 94
            |..|..:..|...|..:|.|..||.|:|.|...|..||.||...:.:....::.:.|:......|
  Rat    35 STLSSCNTDFAFSLYKELVLKNPDKNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETP 99

  Fly    95 KLAV-QDFETLLTDLK-----------QSAAIGCRLRLLSD-------LYAQQRFTFNFRNEFET 140
            :..: |.:|.||..|.           .:..|...|::|::       ||..:.|:.:|:...| 
  Rat   100 EAEIHQGYEHLLQRLNLPGDQVQISTGSALFIKKHLQILAEFQEKARALYQAEAFSTDFQQPHE- 163

  Fly   141 LAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGELVSAPQLESLAEHNTPFLHVSGVTFRA 205
                               |.:.||.....::...:.||:      |:.:..|..:.|:.:.|:.
  Rat   164 -------------------AKKLINDYVRKQTQGKIKELI------SVLDKKTSMVLVNYIYFKG 203

  Fly   206 PWAWAFDPTETQSINFFAGGNRPRLVDAM-FGQHRYRYAEVPALDAQLIEVPFATADLRMLIVFP 269
            .|...|||.:|....|:....:...|..| ..:....|.....|...::|:.: |.:...|.:.|
  Rat   204 KWKMPFDPHDTFQSEFYLDEKKSVKVPMMKIEKLTTPYFRDEELSCSVLELKY-TGNASALFILP 267

  Fly   270 NRPDGLAQLERKLAQSDLHQLRSQLEERKV-ALTLPKLRVLVHSDLKHVLEELGLAKLFTSEVHL 333
            :: ..:.|:|..|....|.:.:..|..|:: .|.:||..:.....|..:|.|||:.::|:.:..|
  Rat   268 DQ-GRMQQVEASLQPETLRRWKDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVFSQQADL 331

  Fly   334 SEVFSSILSSSAPPLGA--VVQSGLLELQEDGGNADDSFSFGDLFRRALP---------LVINHP 387
            |.:      :.|..|..  ||...:|::.|.|..|..:...     :.:|         :..|.|
  Rat   332 SRI------TGAKDLSVSQVVHKAVLDVTETGTEAAAATGV-----KIIPMCAKFYYVTMYFNRP 385

  Fly   388 FFYAIGNGKT 397
            |...|.:..|
  Rat   386 FLMIISDTNT 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn43AdNP_610261.1 serpin42Dd-like_insects 34..407 CDD:381070 82/395 (21%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 84/399 (21%)

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