DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12836 and dynlt3

DIOPT Version :10

Sequence 1:NP_001286153.2 Gene:CG12836 / 35630 FlyBaseID:FBgn0033140 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_991171.1 Gene:dynlt3 / 402901 ZFINID:ZDB-GENE-040927-24 Length:115 Species:Danio rerio


Alignment Length:114 Identity:23/114 - (20%)
Similarity:52/114 - (45%) Gaps:11/114 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 FHT----NFNMERAQKIIEDCIEERLLWDRFSRN-YDSWRALQLAEGLAAEIRDRVKKLNHRRHR 122
            :|:    :||.:.|..::::|||..:....:|:| .:.|.|..:...|.    ..||:....::.
Zfish     4 YHSGDEVSFNPDDASNVVKECIEGIIGGVDYSQNKVNQWTASIVEHSLT----QLVKQGKPFKYI 64

  Fly   123 IVCLLSIVEKQNQGVYQRMCHLMDEKRDNFTQLVFERPTYFMIVVLYLV 171
            :.|  ::::|...|::.......|...|....:.:|..|.:.:|.::.|
Zfish    65 VNC--AVMQKSGAGLHTANSCYWDTTTDGSCTVRWENRTMYCVVSVFAV 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12836NP_001286153.2 DLC-like_TCTEX1D 67..171 CDD:411999 21/104 (20%)
dynlt3NP_991171.1 DLC-like_DYNLT3 15..111 CDD:412011 19/101 (19%)

Return to query results.
Submit another query.