DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and cd81a

DIOPT Version :10

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:234 Identity:54/234 - (23%)
Similarity:95/234 - (40%) Gaps:50/234 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IRYLAFLFNFL-----CAVLGIA--------TIVVNVIAIDQIAPKDQLILGLY--IAVGSIVFL 57
            |:|:.|.|||:     |.:||::        |..:..:..:.........:.:|  ||||:::..
Zfish    12 IKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIAVGAVMMF 76

  Fly    58 LSFFGCFGAIKESICVTWAYATSMLVMLIVSIVMLFVFRM------HFEEDSITKLKQAFAKQTN 116
            :.|.||:|||:||.|        :|......:|:||...:      ...:|.|:  |:......:
Zfish    77 VGFLGCYGAIQESQC--------LLGTFFACLVLLFACEVAAGIWGFMNKDKIS--KEVIGFYDS 131

  Fly   117 TFDAMAEYQTQ---------------YQCCGIYKL-KDYGDAYITVPSSCYDQNDTPYRDGCLAK 165
            .:|..|.|.|.               .||||...| ....|.::|  .:|.:...|...| |..:
Zfish   132 VYDKGATYNTDNKNPATAVLKVFHETLQCCGKGNLFTAIVDRWLT--DTCPEHLRTNAVD-CHTE 193

  Fly   166 METQYEELLKGPKIVGWMLMVIEIGAFTFSTIMGVSLRN 204
            ::..:.:.:....|...::.||.|....||.::...:||
Zfish   194 IKNLFTDKISLIGIAALVVAVIMIFEMIFSMVLCCGIRN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 50/223 (22%)
cd81aNP_571593.2 Tetraspanin 12..228 CDD:459767 52/228 (23%)

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