DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and Tsp47F

DIOPT Version :9

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:235 Identity:61/235 - (25%)
Similarity:107/235 - (45%) Gaps:38/235 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PLMIRYLAFLFNFLCAVLGIATIVVNVIAIDQIAPKDQLILG-------LYIAVGSIVFLLSFFG 62
            |.:|:|:.|.||.|.|:.|:..::...:.:..:...:..:.|       :.|..|.|:||::..|
  Fly     6 PSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLIASLG 70

  Fly    63 CFGAIKESICVTWAYATSMLVMLIVSI---VMLFVFRMHFEEDSITKLKQAFAKQTNTFDAMA-- 122
            ||||||||..:...:|..:.|:.||.:   :...||:...|......|:::. |::|:.|.||  
  Fly    71 CFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESI-KRSNSEDTMAWD 134

  Fly   123 EYQTQYQCCGIYKLKDYG--DAYITVPSSCYDQ-----------------NDTPYRDGCLAKMET 168
            ..|.:..|||:....|:.  .|..|:|.||...                 .|..::.||:.|::.
  Fly   135 NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVGKLKD 199

  Fly   169 QYEE---LLKGPKIVGWMLMVIEIGAFTFSTIMGVSLRNE 205
            :.|:   :|.|   ||..:..|:|.....:..:..|:|.|
  Fly   200 RIEKNAIILIG---VGIGIAFIQILGIVLACYLANSIRQE 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 57/220 (26%)
tetraspanin_LEL 93..174 CDD:239401 24/104 (23%)
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 57/227 (25%)
uroplakin_I_like_LEL 102..205 CDD:239409 24/103 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442936
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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