DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and lbm

DIOPT Version :9

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001260757.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster


Alignment Length:216 Identity:63/216 - (29%)
Similarity:111/216 - (51%) Gaps:13/216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGWSPLMIRYLAFLFNFLCAVLG-IATIVVNVIAIDQIAPKDQLILGLYIAVGSIVFLLSFFGCF 64
            ||.:...::..:.:.|   |||| :|...:..||.:.....::.::..|||. |::.:.:..|.|
  Fly     1 MGCATTSVKIASIVLN---AVLGFLAAGAIGWIAYNADTETEEFVIAAYIAC-SLILVFALLGIF 61

  Fly    65 GAIKESICVTWAYATSMLVMLIVSIVMLFVFRMHFEEDSITKLKQAFAKQTNTFDAMAEYQTQYQ 129
            .||:||:.:|...|..:|::.|:.||...:|...|:..|...:.:. |.|.|..|::   |.:::
  Fly    62 AAIRESVVLTATSAVFLLILAILQIVSTCLFLHEFDVKSGRDMVEV-AWQANNMDSL---QQKHE 122

  Fly   130 CCGIYKLKDYGDAYITVPSSCY-DQNDTP---YRDGCLAKMETQYEELLKGPKIVGWMLMVIEIG 190
            |||....:||....:.:|.||| |...||   |.|||:.|:::.||.......||.|:|:..|:.
  Fly   123 CCGQSSAQDYIHLSLLIPPSCYADLQQTPDHLYLDGCIEKVQSFYESDKLRFIIVSWVLVAFELI 187

  Fly   191 AFTFSTIMGVSLRNELRRSAY 211
            .|..:..:.:|.:|:.||..:
  Fly   188 CFALAVFLAISFKNKQRRMEF 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 57/191 (30%)
tetraspanin_LEL 93..174 CDD:239401 27/84 (32%)
lbmNP_001260757.1 Tetraspannin 8..198 CDD:278750 57/197 (29%)
tetraspanin_LEL <109..169 CDD:239401 22/62 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467706
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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