DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and Tsp42Eh

DIOPT Version :10

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:222 Identity:50/222 - (22%)
Similarity:100/222 - (45%) Gaps:22/222 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MIRYLAFLFNFLCAVLGIATIVVNVIAIDQIAPKDQLILG----------LYIAVGSIVFLLSFF 61
            ::||:..:.:.:||:.|...|......:|.:: ::|.:||          |.:.:|:::.:.|.|
  Fly     7 LLRYVLCVISGICALGGCLLIWYGAWLLDSLS-EEQRMLGMDHGEDLAAVLCVLLGTVIVVASIF 70

  Fly    62 GCFGAIKESICVTWAYATSMLVMLIVSIVML---FVFRMHFEEDSITK-LKQAFAKQTNTFDAMA 122
            |.....|:|..:...||..::.:|||.||::   :.....|..||:.: |...:..|......:.
  Fly    71 GSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGNSTLN 135

  Fly   123 EYQTQYQCCGIYKLKDYGD-AYITVPSSCYDQNDTPYRDGCLAKMETQYEELLKGPKI-----VG 181
            .|:....|||....:||.. ..:..||.|.:::.|.:.:..:...|.:::|.: |.|.     :.
  Fly   136 TYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYV-GAKTANFHSLS 199

  Fly   182 WMLMVIEIGAFTFSTIMGVSLRNELRR 208
            |.|::.|......:..:..|:||...|
  Fly   200 WFLVIFEFAGSVTTCYLVDSIRNHRDR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 46/206 (22%)
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 46/210 (22%)

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