DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and Tsp29Fa

DIOPT Version :9

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:165 Identity:38/165 - (23%)
Similarity:78/165 - (47%) Gaps:27/165 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IRYLAFLFNFLCAVLGIATIVVNVIAIDQIAPKDQLILG--------LYIAVGSIVFLLSFFGCF 64
            ::|..|.||.:..:.||..|.|.. .:..:....:|.|.        ..|.:||.:.::|||||:
  Fly    11 VKYTLFGFNLIFLITGIILIAVGA-GVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCW 74

  Fly    65 GAIKESICVTWAYATSMLVMLIVSI---VMLFVFRMHFEEDSITKLKQAFAKQTNTFDAM----- 121
            ||:||:.|:..:::..:.::.|:.:   :..:|.|    .|:...:|.:.....|.::::     
  Fly    75 GALKENYCLVLSFSVMLAIIFILELAAGISGYVLR----NDASDLIKTSLTYSLNEYNSINPNAT 135

  Fly   122 ----AEYQTQYQCCGIYKLKDYGDAYIT--VPSSC 150
                .:.|.:::|||:....|:..|:..  :|.||
  Fly   136 TKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISC 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 38/165 (23%)
tetraspanin_LEL 93..174 CDD:239401 14/69 (20%)
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 38/165 (23%)
tetraspanin_LEL 106..210 CDD:239401 14/69 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442994
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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