DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and Cd63

DIOPT Version :9

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:XP_008763246.1 Gene:Cd63 / 29186 RGDID:62080 Length:262 Species:Rattus norvegicus


Alignment Length:236 Identity:66/236 - (27%)
Similarity:104/236 - (44%) Gaps:53/236 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LMIRYLAFLFNFLCAV----LGIATIVVNVIAIDQIAPKDQLILGLYIAVGSIVFLLSFFGCFGA 66
            |.:..|||.   .|||    :|:|..||...||........|:..:.||||:.:||::|.||.||
  Rat    38 LYVLLLAFC---ACAVGLIAIGVAVQVVLKQAITHETTAGSLLPVVIIAVGAFLFLVAFVGCCGA 99

  Fly    67 IKESIC--VTWAYATSMLVMLIVSIVML-FVFRMHFEED---SITKLKQAFAKQTNTFDAMAEYQ 125
            .||:.|  :|:|...|:::::.|::.:. :|||...:.:   |..|..|.:.....|...:.:.|
  Rat   100 CKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFSKSFQKQMQNYLTDNKTATILDKLQ 164

  Fly   126 TQYQCCGIYKLKDY----GDAYITVPSSCYDQ------ND----TPYRDGCLAKMETQYEELLKG 176
            .:.:|||.....|:    |.|...||.||...      ||    |.:..||   :||        
  Rat   165 KENKCCGASNYTDWERIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQGC---VET-------- 218

  Fly   177 PKIVGWM----LMV---------IEIGAFTFSTIMGVSLRN 204
              |..|:    |:|         :|:....||..:..|:|:
  Rat   219 --IAAWLRKNVLLVAGAALGIAFVEVLGIIFSCCLVKSIRS 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 61/223 (27%)
tetraspanin_LEL 93..174 CDD:239401 25/97 (26%)
Cd63XP_008763246.1 Tetraspannin 33..255 CDD:278750 64/232 (28%)
ATP-synt_A <72..131 CDD:294288 19/58 (33%)
CD63_LEL 129..227 CDD:239419 27/110 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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