DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Er and tsp-5

DIOPT Version :9

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:231 Identity:51/231 - (22%)
Similarity:92/231 - (39%) Gaps:38/231 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 MIRYLAFLFNFLCAVLGI-------------------ATIVVNVIAIDQIAPKDQLILGLY---- 48
            :..:|.|:.|....|:|:                   .|.:||::::|.|.     ...:|    
 Worm     9 LANFLFFILNLGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIE-----CFYVYRTIS 68

  Fly    49 IAVGSIVFLLSFFGCFG---AIKESICVTWAYATSMLVMLIVSIVMLFVFRMHFEEDSI----TK 106
            |.:|..:.:|.|.|||.   ..|.::.|.......:.|:.||:|||......|...:.:    .:
 Worm    69 IMIGGCMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKIVAIVMFLANNDHLRREFVGVYRDE 133

  Fly   107 LKQAFAKQTNTFDAMAEYQTQYQCCGIYKLKDYGDAYITVPSSCY--DQNDTPYRDGCLAKMETQ 169
            |...:...:.|.:.:....|..:|||....:|:..|. ..|:||.  .:|.....:||.......
 Worm   134 LVANYHNNSRTKNTLDWVHTSLKCCGANGCEDFLPAG-NFPTSCECGTKNAVVRMEGCALITWAV 197

  Fly   170 YEELLKGPKIVGWMLMVIEIGAFTFSTIMGVSLRNE 205
            :|:.......:|.:.|:||:|...|:.|:...:|.|
 Worm   198 FEDGTLQVAFLGLICMLIELGLMIFAAIVIDRIRRE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 47/218 (22%)
tetraspanin_LEL 93..174 CDD:239401 16/86 (19%)
tsp-5NP_502621.3 Tetraspannin 11..223 CDD:278750 47/217 (22%)
tetraspanin_LEL 116..191 CDD:239401 14/75 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1406905at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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