DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Er and Cd63

DIOPT Version :10

Sequence 1:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster
Sequence 2:NP_031679.1 Gene:Cd63 / 12512 MGIID:99529 Length:238 Species:Mus musculus


Alignment Length:225 Identity:63/225 - (28%)
Similarity:103/225 - (45%) Gaps:31/225 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LMIRYLAFLFNFLCAV----LGIATIVVNVIAIDQIAPKDQLILGLYIAVGSIVFLLSFFGCFGA 66
            |.:..|||.   .|||    :|:|..||...||........|:..:.||||:.:||::|.||.||
Mouse    14 LYVLLLAFC---ACAVGLIAIGVAVQVVLKQAITHETTAGSLLPVVIIAVGAFLFLVAFVGCCGA 75

  Fly    67 IKESIC--VTWAYATSMLVMLIVSIVML-FVFRMHFEED---SITKLKQAFAKQTNTFDAMAEYQ 125
            .||:.|  :|:|...|:::::.|::.:. :|||...:.:   |..:..|.:.|...|...:.:.|
Mouse    76 CKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFNKSFQQQMQNYLKDNKTATILDKLQ 140

  Fly   126 TQYQCCGIYKLKDY----GDAYITVPSSCYDQ------ND----TPYRDGCLAKMETQYEE--LL 174
            .:..|||.....|:    |.|...||.||...      ||    |.:..||:..:.....:  ||
Mouse   141 KENNCCGASNYTDWENIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQGCVETIAIWLRKNILL 205

  Fly   175 KGPKIVGWMLMVIEIGAFTFSTIMGVSLRN 204
            .....:|  :..:|:....||..:..|:|:
Mouse   206 VAAAALG--IAFVEVLGIIFSCCLVKSIRS 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ErNP_523644.1 Tetraspanin 8..195 CDD:459767 58/212 (27%)
Cd63NP_031679.1 Tetraspanin 10..229 CDD:459767 61/219 (28%)
CD63_LEL 105..203 CDD:239419 23/97 (24%)
Lysosomal targeting motif. /evidence=ECO:0000269|PubMed:21041449 234..238 63/225 (28%)

Return to query results.
Submit another query.