DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and Tsp42Eb

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster


Alignment Length:236 Identity:57/236 - (24%)
Similarity:95/236 - (40%) Gaps:34/236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGTKALKVSSFVLDFLCCVLAALTIAACSYAL------IAFSHSVAIRVPSILGIVLGGLLFF 59
            |:|.:...|...::|:.:......|.|...|..|      .||...|..:...|..||:|.:.|.
  Fly     1 MNCLSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMGNFTAFDGGVNTQTIPICIIVIGSVTFV 65

  Fly    60 STIFGCIAALRESIRMTWIYAAILLALVFSQITV---ILAQPINYELLANETIYDAWQ----GQL 117
            ...|||...:||:...|.|||..:|.|...|:.:   |.|....:.....:.:..||.    .|.
  Fly    66 VAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDKFLSSMGKAVDKAWDENNAAQG 130

  Fly   118 YHSDRMSYFEIKYHCCGQTGPANYPDSGLVIPQSC--YFNQNATVTTDLYT--VGCNHQLAAAFV 178
            |..|.:   ::.:.|||.||...|.    .:|.||  |.::......::|:  .||..:....:.
  Fly   131 YPMDAL---QLAFSCCGNTGYQQYE----TVPSSCCGYKDRTKVCEAEIYSQRPGCRQEFVDFWA 188

  Fly   179 KGT---RWEKITDWSVVGVEILTVIIAGLLAITLQNAERRR 216
            ..|   ||..:    ::.:..|.:.|   ::..|.:|.|:|
  Fly   189 SNTDLIRWSSL----IIALFELGIFI---MSCCLASAMRKR 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 51/220 (23%)
tetraspanin_LEL 95..173 CDD:239401 19/85 (22%)
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 52/224 (23%)
tetraspanin_LEL 104..191 CDD:239401 19/93 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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