DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and tspan9b

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001002186.1 Gene:tspan9b / 431733 ZFINID:ZDB-GENE-040704-25 Length:239 Species:Danio rerio


Alignment Length:239 Identity:46/239 - (19%)
Similarity:109/239 - (45%) Gaps:42/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKVSSFVLDFL-----CCVLAA---LTIAACSYALIAFSHSVAIRVPSILGIVLGGLLFFSTIFG 64
            :|...|:.:.|     |.:|..   |:::..|:|  .||.|......:.|.|.||.::..:...|
Zfish     9 VKYMMFLFNLLFWLSGCGLLGVGIWLSVSQGSFA--TFSPSFPSLSAANLVITLGSVVMVTGFLG 71

  Fly    65 CIAALRESIRMTWIYAAILLALVFSQITVILAQPINYELLANETIYDAWQG-QLYHSDR------ 122
            |:.|::|:..:...:..:||.::.:::.:::...:..|.::.....|...| :||::|.      
Zfish    72 CLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYTEKVSENAKQDLKDGLRLYNTDNNVGLRN 136

  Fly   123 -MSYFEIKYHCCGQTGPANYPDS--GLVIPQSC---YFNQNATVTTDLY-TVGCNHQLAAAFVKG 180
             .:..:.::.|||.||.:::.::  ...:|..|   ::.:....||::: :.||           
Zfish   137 AWNIIQAEWQCCGVTGLSDWHEALQEKSVPDRCCQEHYTECGRNTTNVFWSQGC----------- 190

  Fly   181 TRWEKITDW-----SVVGVEILTVIIAGLLAITLQNAERRRLYR 219
              :||:.:|     .::|...:.|::..||.:.......::::|
Zfish   191 --YEKVEEWLNDNKHLLGTIAMCVLVLQLLGMAFSMTLYQQIHR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 45/227 (20%)
tetraspanin_LEL 95..173 CDD:239401 17/91 (19%)
tspan9bNP_001002186.1 Tetraspannin 8..230 CDD:278750 45/235 (19%)
NET-5_like_LEL 105..202 CDD:239418 20/109 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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