DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and Tsp47F

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:241 Identity:62/241 - (25%)
Similarity:107/241 - (44%) Gaps:35/241 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SCGTKALKVSSFVLDFLCCVLAALTIAACSYALIA----FSHSVAIRV--PSILGIVLGGLLFFS 60
            |||...:|...|..:.|..: :.|.|......::|    |:|.|..||  |.|:.||.|.::|..
  Fly     3 SCGPSLIKYVLFAFNVLFAI-SGLGILIAGAVVLADVNEFNHFVEGRVLAPPIVLIVTGLIIFLI 66

  Fly    61 TIFGCIAALRESIRMTWIYAAILLALVFSQITVILAQPI---NYELLANETIYDAWQGQLYHSDR 122
            ...||..|::||..:...:|.:|..:...::.|.:|..:   :.|.:...::.::.: :....|.
  Fly    67 ASLGCFGAIKESPTLLITFAVLLAVIFIVELAVGIAASVFKKDLEGMVKNSLQESIK-RSNSEDT 130

  Fly   123 MSYFEI--KYHCCGQTGPANYP--DSGLVIPQSC----YFN-------QNATVTTDLY-TVGCNH 171
            |::..|  |..|||...||::.  .:...:|.||    |.:       ::..:..|.| .|||..
  Fly   131 MAWDNIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPALGKDKYFQVGCVG 195

  Fly   172 QLAAAFVKGTRWEKITDWSV-VGVEILTVIIAGL-LAITLQNAERR 215
            :|.      .|.||.....: ||:.|..:.|.|: ||..|.|:.|:
  Fly   196 KLK------DRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQ 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 56/227 (25%)
tetraspanin_LEL 95..173 CDD:239401 20/96 (21%)
Tsp47FNP_725044.1 Tetraspannin 9..233 CDD:278750 58/231 (25%)
uroplakin_I_like_LEL 102..205 CDD:239409 24/109 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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