DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eq and Tsp42Er

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523644.1 Gene:Tsp42Er / 35629 FlyBaseID:FBgn0033139 Length:211 Species:Drosophila melanogaster


Alignment Length:213 Identity:60/213 - (28%)
Similarity:109/213 - (51%) Gaps:11/213 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKVSSFVLDFLCCVLAALTIAACSYALIAFSHSVAIRVPSILG--IVLGGLLFFSTIFGCIAALR 70
            ::..:|:.:|||.||...||.....|:    ..:|.:...|||  |.:|.::|..:.|||..|::
  Fly     8 IRYLAFLFNFLCAVLGIATIVVNVIAI----DQIAPKDQLILGLYIAVGSIVFLLSFFGCFGAIK 68

  Fly    71 ESIRMTWIYAAILLALVFSQITVILAQPINYELLANETIYDAWQGQLYHSDRMSYFEIKYHCCGQ 135
            |||.:||.||..:|.::...|.::....:::|..:...:..|:..|....|.|:.::.:|.|||.
  Fly    69 ESICVTWAYATSMLVMLIVSIVMLFVFRMHFEEDSITKLKQAFAKQTNTFDAMAEYQTQYQCCGI 133

  Fly   136 TGPANYPDSGLVIPQSCYFNQNATVTTDLYTVGCNHQLAAAFVKGTRWEKITDWSVVGVEILTVI 200
            ....:|.|:.:.:|.||| :||.|.    |..||..::...:.:..:..||..|.::.:||....
  Fly   134 YKLKDYGDAYITVPSSCY-DQNDTP----YRDGCLAKMETQYEELLKGPKIVGWMLMVIEIGAFT 193

  Fly   201 IAGLLAITLQNAERRRLY 218
            .:.::.::|:|..||..|
  Fly   194 FSTIMGVSLRNELRRSAY 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 55/202 (27%)
tetraspanin_LEL 95..173 CDD:239401 21/77 (27%)
Tsp42ErNP_523644.1 Tetraspannin 8..195 CDD:278750 55/195 (28%)
tetraspanin_LEL 93..174 CDD:239401 21/85 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.