DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eq and Tsp42El

DIOPT Version :9

Sequence 1:NP_523643.2 Gene:Tsp42Eq / 35628 FlyBaseID:FBgn0033138 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster


Alignment Length:222 Identity:61/222 - (27%)
Similarity:105/222 - (47%) Gaps:9/222 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSCGTKALKVSSFVLDFLCCVLAALTIAACSYALIAFSHSVAIRVPSILGIVLGGLLFFSTIFGC 65
            |.|.|..:|.|.|:.:.|..:|..|.:........|...:.||.:     ::|||.:...::|||
  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGWGAMPDAYAIGI-----LILGGTILVISLFGC 60

  Fly    66 IAALRESIRMTWIYAAILLALVFSQITVILAQPIN-YELLANETIYDAWQGQLYHSDRMSYFEIK 129
            ..|:|||.||.|.||::||.|:...:..|:..|.: ::..|.:|:.:.|:.:......|...:..
  Fly    61 CGAVRESPRMLWTYASLLLILLLLIVAFIILNPKDVFKKYALQTVENQWELEQTKPGSMDIIQKT 125

  Fly   130 YHCCGQTGPANYPDSGL---VIPQSCYFNQNATVTTDLYTVGCNHQLAAAFVKGTRWEKITDWSV 191
            |:|||:....:|.|...   .:|.||..:.:.....:||..||..::..||..........:|.:
  Fly   126 YYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLGYLEWGL 190

  Fly   192 VGVEILTVIIAGLLAITLQNAERRRLY 218
            :|...:.:::|.:|||...|..||..|
  Fly   191 LGFNAVILLLAIILAIHYTNRRRRYNY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EqNP_523643.2 Tetraspannin 8..209 CDD:278750 54/204 (26%)
tetraspanin_LEL 95..173 CDD:239401 18/81 (22%)
Tsp42ElNP_523638.1 Tetraspannin 7..196 CDD:278750 50/193 (26%)
tetraspanin_LEL 94..178 CDD:239401 19/83 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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